Panicum virgatum (switchgrass): 120701676
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Entry
120701676 CDS
T07260
Name
(RefSeq) putative mannan endo-1,4-beta-mannosidase 5 isoform X1
KO
K19355
mannan endo-1,4-beta-mannosidase [EC:
3.2.1.78
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00051
Fructose and mannose metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
120701676
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.78 mannan endo-1,4-beta-mannosidase
120701676
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Gene cluster
GFIT
Motif
Pfam:
Cellulase
Glyco_hydro_42
Motif
Other DBs
NCBI-GeneID:
120701676
NCBI-ProteinID:
XP_039841534
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Position
1K:complement(29090201..29093160)
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AA seq
482 aa
AA seq
DB search
MVATIMETIFKEKSRGKVSLIHFLVRCFAVAATILLLTDRIHAHVDGVEILGNDVDAPPS
SVQGIEVINSEAIRDDQWQTVKTRGSQFVVGDRPFYVNGFNAYWLMILAADPSTRGKVTE
VFQQAAAVGLTVCRTWGFNDGGWRALQKSPAVYDEDVFKALDFVVSEARNYRIRLILSLI
NNWDGYGGKAQYVKWARDAGLNITSDDDFFSDQTVKGYFKNHVKNMLTRVNTYTNVTYKD
DPTIFAWELMNELRCTSDPTGNKLQSCMQAWIQEMAFHVKSIDPDHLLEVGAEGFYGPSS
PARLQANPNTYAGQVGTDFIRNHRVLGVDFASVHIYPDTWMPGASVDAQLKFAQSWMQAH
IADAEGTLGMPVVFTEFGVSTKARSAFNATSRDRFIQAVYGLLLDSTRLGGAGAGALLWQ
VFPEGAEYMDDGYGVVLPKAKATAGIMSVHSRRLVVFNSRCAWSCRWGCRKEEEQSEDVD
DD
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggttgcaaccatcatggagacaatattcaaagagaaatcaagagggaaagtttcactg
atccatttcctagtccgatgttttgccgtggcagctaccattttgctcctgacggatagg
atccacgctcatgttgatggtgtagagattctcggcaacgacgtcgatgcgccgccgtcg
tctgtccaaggaatagaagtaataaacagcgaggcgatccgcgacgaccagtggcagacg
gtcaagaccaggggcagccagttcgtcgtcggtgaccggccgttctacgtgaacggcttt
aacgcgtactggctgatgatcctcgccgccgacccgtcgaccaggggcaaggtcaccgag
gtcttccagcaggcggcggcggtcggcctcacggtgtgccgcacctggggcttcaacgac
ggtggctggagggcgcttcagaagtcacctgctgtctatgacgaggatgtcttcaaggcg
ttggatttcgtagtgagtgaggcaaggaactacaggatcaggctgatactgtcgctgatc
aacaactgggacggctacggcggcaaggcgcagtacgtgaaatgggccagggacgccggc
ctcaacatcacctccgacgatgacttcttctccgaccaaaccgtaaagggctacttcaag
aaccacgtcaagaacatgctgacgagggtgaacacgtacacgaacgtgacgtacaaggat
gacccaaccatcttcgcctgggagctcatgaatgaactgcgctgcacgtcggatccaacc
gggaacaagctgcagtcatgtatgcaggcgtggatccaagagatggctttccatgtgaag
tccatcgacccggatcacctgctggaggtcggggccgagggcttctacggcccctcgtcg
ccggcgcggcttcaggccaacccgaacacctacgccggccaggtcggcaccgacttcatc
cgcaaccaccgagtcctgggcgtcgacttcgcctccgttcacatctacccggacacctgg
atgccgggcgcgagtgtggatgcacagctcaagtttgcgcagtcgtggatgcaggcgcac
atcgccgacgccgagggcacgctcggcatgccggtggtgttcacggagttcggggtgtcc
accaaggctcggagcgccttcaacgcgacgtcgagggaccggttcatccaggcggtgtac
gggttgctcctggactcgacgcgtctcggcggcgccggagcgggggccctgctctggcag
gtgttcccggagggggcggaatacatggacgacggctacggcgttgtgctgcccaaagcg
aaggccaccgccgggatcatgtcggtgcactccaggcggctggtggtcttcaactccagg
tgcgcgtggagctgccgctgggggtgcaggaaggaggaggagcagtcggaggatgttgat
gatgactga
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