Panicum virgatum (switchgrass): 120701930
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Entry
120701930 CDS
T07260
Name
(RefSeq) protein NRT1/ PTR FAMILY 7.3-like
KO
K26554
MFS transporter, POT/PTR family, low-affinity nitrate transporter
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120701930
Transporters [BR:
pvir02000
]
Major facilitator superfamily (MFS)
Nitrate/nitrite transporters
Proton-dependent oligopeptide transporter (POT/PTR) family [TC:
2.A.17
]
120701930
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Gene cluster
GFIT
Motif
Pfam:
PTR2
Motif
Other DBs
NCBI-GeneID:
120701930
NCBI-ProteinID:
XP_039841660
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Position
4K:complement(14356186..14368956)
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AA seq
578 aa
AA seq
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MESPNTSSIPMTPLQSEFSGSSSSNNETENTTPSLYTEDGTVDFRGNPAVRATTGGKKTT
AILLVNYALMNLAFGGVAVDLVVFLRRVLRQENAEAANNISKWTGTVYIFALFGAFLSDS
YVGRYITCIVFQVIYLVGLVMLSLSSLLFLVVPSQCGDGVGLRPCRPPSRLGIAMFYVST
YTAAFGVGGYQPSVATFGADQFDESDATERRSKLAFFSHFYLALNVGSLFSNSFLAFYED
KGMWIRGFWVSTVAVALGLVVFLLGTPYYRHFKPTGNPVTRMVQVFTAAFHKRHIQMPPG
EDLHEVEDEDSGIRKLLHRDQLRCPDKAAIVTEEDYHAGNTKNPWRLCTVTQVEEVKCIL
GMMPIWICTIEYSVEFTQMASTFVEQGTAMDTNLFGRFRVPAASMSVFDISSVLLSVLAY
RFVVAPAASRFTRNPDGITDLQRMGSGLVIALLGMLAAAVVEINRRRRVVAVDQPSPMSV
LWQAPQYALIGASEVFMYIGQLDFFSGQMPDGLKCFGSSLCMASISLGNFASMLAVSAVT
SVTARRNRRGWITKNLNYGHLELFFLLLVGLSSSCLTS
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggagtctccaaacacaagtagcatacccatgactcccctgcaaagtgaattctcagga
tcaagttcttcgaacaacgagactgaaaatacaacaccatctttatacactgaagatggc
acagttgacttcaggggaaaccctgcagttagagccaccacggggggaaagaaaaccact
gccatactgcttgtgaactatgctcttatgaacttggcattcggtggagttgccgtagac
ctcgtcgtgttcctacggagggtgcttcgtcaggagaacgccgaggctgccaacaacatc
agcaagtggaccggcactgtctacatcttcgcgctcttcggtgccttcctcagcgactcc
tacgtggggcgctacatcacctgcatcgtgttccaggtcatctatctcgtgggtctggtg
atgctgtccctgtcatccttgctcttcctggtggtgccctcccagtgcggcgacggcgta
gggctgaggccgtgccgaccgccgtcgcggctcggcatcgcgatgttctacgtgtcaacc
tacacagccgcattcggggtcggcgggtaccagccgtcggtggcgacgttcggggcggac
cagttcgacgagtcggacgccacggagcggcgctccaagctcgccttcttcagccacttc
tacctggcgctcaacgtcggctccctcttctccaactccttcctggcgttctacgaggac
aagggcatgtggatcaggggcttctgggtctccacggtggccgtcgcgcttgggcttgtc
gtcttcctcctgggcacgccgtactaccgccacttcaagcccaccggcaacccggtcacg
cgcatggtgcaggtgttcaccgctgcgttccacaagaggcacatccagatgccccctggt
gaggaccttcatgaggttgaagatgaggattcagggattcgcaaactcttgcacagggat
caactcaggtgtcctgacaaggcagccattgtgactgaggaggactaccacgctgggaac
accaagaacccatggaggttgtgcacggtgacgcaggtggaggaggtgaagtgcatcctg
ggcatgatgcccatatggatctgcaccatcgaatactcggtcgagttcacccaaatggcg
tccacgttcgtggagcaaggcacggccatggacaccaacctcttcggcaggttccgcgtg
cccgccgccagcatgtcggtgttcgacatctccagcgtgctcctctccgtcctcgcctac
cgcttcgtcgtcgcgcccgcggcgtcgaggttcaccaggaaccccgacggcatcaccgac
ctccagcgcatgggctccgggctggtcatcgcactactcggcatgctcgccgcggcggtc
gtcgagatcaaccgccggcgacgcgtcgtggccgtggaccagccgagcccgatgagcgtc
ctgtggcaggcgccgcagtacgcgctgatcggcgcctcggaggtgttcatgtacataggc
cagctggatttcttcagcgggcagatgccggatggcctcaagtgcttcgggagctccctg
tgcatggcgtccatctcgctcggaaactttgcgagcatgctggcggtcagcgcggtcacc
agcgtcaccgctcggcgaaacaggaggggctggatcaccaagaacctgaactatggccac
cttgaactgttcttcctgctcctggttggtctgtcgagttcttgtttgacaagttga
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