Panicum virgatum (switchgrass): 120701934
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Entry
120701934 CDS
T07260
Name
(RefSeq) U-box domain-containing protein 9-like
KO
K27971
U-box domain-containing protein 9 [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120701934
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120701934
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
U-box type E3
120701934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
Arm
ARM_ARMC5
zf-Nse
ABATE
GvpG
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
120701934
NCBI-ProteinID:
XP_039841666
LinkDB
All DBs
Position
1K:complement(29514449..29518405)
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AA seq
460 aa
AA seq
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MAKPTPVASAEEAAALRRRLRRLVAAVAAGSADAEAFDEAAEALAKLRDGELGPRKDRAV
AAGGGVDKGGTEAAAVPEQFLCPISSEIMRDPVVLASGQTYDRRFIQEWLSAGNRTCPQT
QQVLSNTILIPNHLVRSMISQWCTDNGITLPPVENQEEDLVTNNERKTFSKIFERIASSS
NLSEQREAIKDLRLLTKCNSSLRAAIGEKPDSISQMISTVSNPELENNAEVLEDMVTTIL
NLSIHESNKKIIGDDPLAIPFLIRTLQSGTMEARSNAAAAIFSLSALNSNKAKIGELGAM
RHLVDLLEHGSMIAKKDAASAIFNLCMLHENKSRATKSGVIDVTLKAIADDSLVDESLAI
LALLSGDHETVEEIGETGGVASMLRVIKEDQCKRNKENAVAVLFAVCMYDRTKLREIAED
ENLNGSLAWLAQNGTSRARRKAAGILDKMKRAVHHTHYSC
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagccgaccccggtggcctcggcggaggaggcggcggcgctgcggcgccggctg
aggcgtctggtggccgcggtggcggccgggagcgccgacgcggaggcctttgacgaggcg
gccgaggcgctcgccaagctcagggacggcgagctcggcccccgcaaggaccgcgctgtt
gccgctggcggcggggtggacaagggcggcacggaggctgccgcggtcccggagcagttc
ctgtgccccatctcctcggagatcatgagggatcccgtcgtcctcgcctccggccagaca
tatgaccgtcgcttcattcaagaatggttaagtgctggaaaccgaacatgtccacagacc
cagcaagtcctttcaaatacaattctcatcccaaaccatcttgtgagaagcatgatctca
cagtggtgcacggataatgggatcactctgccaccagttgagaaccaagaagaagatctg
gtcacaaataatgagcggaagacatttagtaaaatatttgagaggattgcatcatcgtca
aacctatctgagcagagggaagctattaaagatctcaggctgctgactaagtgcaacagt
tcactgagagcagccattggagagaaaccagattcaatctcacagatgatttccactgta
tctaacccagagctagagaacaatgccgaggttctggaagatatggtgacaactattctt
aatctttcaattcatgagagcaacaagaagatcattggagatgacccattagcaatcccc
ttcctcataaggaccttacagtcaggaaccatggaggcccgcagcaatgctgcagctgcc
atcttcagtttgtctgctcttaacagcaacaaggcaaagattggtgaactaggcgcgatg
agacatctggtggatctcctcgaacacggcagcatgatagcgaagaaagatgcagcatca
gctatcttcaacctctgcatgctgcacgagaacaaatcaagggccaccaagagcggggtc
atcgacgtgaccctgaaggccattgctgacgactcgcttgtggacgagtccctggccatc
cttgccctgctgtcaggtgaccacgagacggtggaggagattggcgagaccggcggtgtg
gcctccatgctccgcgttataaaggaggaccagtgcaagcgcaacaaggagaacgcggtg
gcggtgctgtttgcggtctgcatgtacgaccgcaccaagctgcgggagatcgcggaggat
gagaacctgaacggctccctcgcctggcttgcgcagaatggcacctcgagggcgcggagg
aaggccgctgggatcctcgacaagatgaagagggccgtgcaccacacccactactcttgc
tag
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