Panicum virgatum (switchgrass): 120701991
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Entry
120701991 CDS
T07260
Name
(RefSeq) nuclear transcription factor Y subunit B-3-like
KO
K08065
nuclear transcription Y subunit beta
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120701991
Transcription factors [BR:
pvir03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
120701991
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Gene cluster
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
CENP-T_C
TFIID-18kDa
Bromo_TP
MFMR
Motif
Other DBs
NCBI-GeneID:
120701991
NCBI-ProteinID:
XP_039841708
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All DBs
Position
4K:complement(18309317..18316154)
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AA seq
222 aa
AA seq
DB search
MSNGVGINGSNEGRSPVMIREQDRLLPVANVSRIMRHALPPHAKISDDAKEMIQDCVSEF
ISFVTGEANERCHTEHRKTVTAEDLVWAMNRLGFDDYVRPLNAFLQRMREIEGGGSGRGS
RRGSSLVALQGAQTLRPAYPDAPQGYAVRPVPRPVPVPASSVASRFGSRHLQLPGGQRSM
VPYYGGAAAFRAVGSHGGFYADEASSSDEAPPAARRAGSRRY
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatggagttggaatcaacggtagcaatgaaggaagaagtccggtgatgatccgg
gagcaggacaggctgttgcccgtggccaacgtgtcccgcatcatgcgccatgcgctccct
ccccacgccaagatctccgacgacgccaaggagatgatccaggactgcgtgtccgagttc
atcagcttcgtgaccggcgaggcgaacgagcggtgccacaccgagcaccgcaagaccgtc
accgcggaggacctcgtgtgggccatgaaccgcctcggcttcgacgactacgtcaggccc
ctcaacgccttcctccagcgcatgcgcgagatcgagggcggcggttccgggcgcggctct
cgccgcgggtcgtccctggtcgcactccagggtgcgcagacgctgcgccccgcctaccca
gatgcaccgcaaggttacgccgtccggcccgtccctcgcccggttcctgttccagccagc
agcgtggcgtcgcgcttcggcagcaggcacctgcagcttcccggcggccagcgttccatg
gttccctactacggaggagcggcggcgttccgagctgtggggagtcatgggggattctac
gctgacgaggcaagctcgtcggacgaggcaccaccggcggcgcggcgtgctggatcgcgc
cgctactag
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