Panicum virgatum (switchgrass): 120701993
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Entry
120701993 CDS
T07260
Name
(RefSeq) transcriptional activator hap3-like
KO
K08065
nuclear transcription Y subunit beta
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120701993
Transcription factors [BR:
pvir03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
120701993
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Gene cluster
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
120701993
NCBI-ProteinID:
XP_039841710
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All DBs
Position
4K:complement(18351201..18351647)
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AA seq
148 aa
AA seq
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MRHGSPPNSKIAGDAKEAVDNCVAEFSPVLIRAAVEECRQDRRTTVTVDDLILALSNLGF
DDSVRLLALYLRRYREIEGTRPRARHTLMVALEHPTAPAVEAEVQSPAPPSPGLDLQLGP
PQVRDVTELGPHADVCAVWRAADAAAAA
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atgcgccatggctcgccaccgaattccaagatcgccggcgacgcgaaggaggccgtggac
aactgtgtcgccgagttcagccccgtcttaatccgagctgccgtggaggagtgcaggcag
gacaggcgcaccaccgtgaccgttgacgacctcatcctcgccttgagcaacctcgggttc
gacgacagcgtcaggctcctggccttgtacctccgccgctaccgtgagattgagggcacc
aggccacgcgcccggcacaccttgatggtagcgctggagcacccgacggccccggcggtg
gaggcggaggtgcagtcgccggcgccgccgtcgccaggtctggacctgcaactgggcccg
ccacaggtgcgtgacgtcactgagctgggcccgcacgccgatgtgtgcgcggtgtggcgt
gcggccgatgcagcggccgcagcatga
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