Panicum virgatum (switchgrass): 120702041
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Entry
120702041 CDS
T07260
Name
(RefSeq) nuclear transcription factor Y subunit B-10-like
KO
K08065
nuclear transcription Y subunit beta
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120702041
Transcription factors [BR:
pvir03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
120702041
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GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
CENP-T_C
TFIID-18kDa
Bromo_TP
MFMR
Motif
Other DBs
NCBI-GeneID:
120702041
NCBI-ProteinID:
XP_039841751
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All DBs
Position
4K:25642558..25643250
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AA seq
230 aa
AA seq
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MPPEHAAVAKEAMVTEPLVPSTEPVMIREQDRLLPVANVSRIMRHALPPHAKISDDAKEM
IQDCVSEFISFVTGEANERCHTEHRKTVTAEDLVWAMNRLGFDDYVRPLNAFLQRMREIE
GGGSGRGSRRGSSLVALQGAQTLRPAYPDAPQGYAVRPVPRPVPVPASSVASRFGSRHLQ
LPGGQRSMVPYYGGAAAFRAVGSHGGFYADEASSSDEAPPAARRAGSRRY
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgccaccggagcacgccgccgttgccaaggaagcaatggtgactgaaccgcttgtgccc
agcactgagccggtgatgatccgggagcaggacaggctgttgcccgtggccaacgtgtcc
cgcatcatgcgccatgcgctccctccccacgccaagatctccgacgacgccaaggagatg
atccaggactgcgtgtccgagttcatcagcttcgtgaccggcgaggcgaacgagcgttgc
cacaccgagcaccgcaagaccgtcaccgcggaggacctcgtgtgggccatgaaccgcctc
ggcttcgacgactacgtcaggcccctcaacgccttcctccagcgcatgcgcgagatcgag
ggcggcggttccgggcgcggctctcgccgcgggtcgtccctggtcgcactccagggtgcg
cagacgctgcgccccgcctacccagatgcaccgcaaggttacgccgtccggcccgtccct
cgcccggttcctgttccagccagcagcgtggcgtcgcgcttcggcagcaggcacctgcag
cttcccggcggccagcgttccatggttccctactacggaggagcggcggcgttccgagct
gtggggagtcatgggggattctacgctgacgaggcaagctcgtcggacgaggcaccaccg
gcggcgcggcgtgctggatcgcgccgctactag
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