Panicum virgatum (switchgrass): 120702066
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Entry
120702066 CDS
T07260
Name
(RefSeq) 70 kDa peptidyl-prolyl isomerase-like
KO
K09571
FK506-binding protein 4/5 [EC:
5.2.1.8
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120702066
Enzymes [BR:
pvir01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
120702066
Chaperones and folding catalysts [BR:
pvir03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
FKBP
120702066
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FKBP_C
TPR_1
TPR_2
TPR_8
TPR_19
TPR_11
TPR_12
TPR_16
TPR_17
Fis1_TPR_C
TPR_CcmH_CycH
LBR_tudor
ARM_TT21
ANAPC3
Motif
Other DBs
NCBI-GeneID:
120702066
NCBI-ProteinID:
XP_039841777
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All DBs
Position
1K:complement(29666139..29670675)
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AA seq
683 aa
AA seq
DB search
MDDDYDFPAAGGYDPMAAMGMGMGGLGLGGAMGMGMGGYGLGGPMGMGMGDYGLGGGEDD
EEAMKDLYAGAGAGDGEGDHPPAELKVGEEREIGTEGLKKKLVKEGEGWERPGAGDEVQV
HYTGTLLDGTKFDSSRDRDSTFKFTLGHGQVIKGWDLGIKTMKKGENAIFTIPPELAYGE
DGSPPVIPPNATLQFDVELLSWASIKDICKDGGILKKVLSEGDKWENPRDPDEVFVNYEA
RLEDGTVVSKSDGVEFTVKDGLFCPAISKAVKTMKKNEKALLTVKPQYGFGEQGRPASGE
EAAVPPNSTLCIDLQVVSWKTVTEIGDDKKVLKKILQEGEGYDRPNDCAIVRVKLIGKLA
DGTLFVKKGHDGEEPFEFKTDEDQVIEGLDKAVLSMKKGEVALVTIPPHHAFGANETAQD
LAVVPPNSSVYYEVELVSFDKEKDSWDLKNNTEKIEAAAKKKDEGNVWFKVGKYARASKR
YKKALSFIEYDSSFSEEEKQLSKPLKISCKLNNAACKLKLKDYKEAKELCTEVLELDSTN
VKALYRRAQAHTYLVDLDLAEADIKKALEIDPDNRDVKMGYRRLKETVKEYKRRDAKLYG
NMISKLSKVEDTEGNDHESQGRTKKRGLWPLAALLRKFFTADGTKGSTLWLVLRLLILVF
LVVAICVGYYMQSGVQEIDCINC
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgactacgacttcccggcggccggcgggtacgaccccatggccgccatgggg
atggggatggggggcctcggcctcggcggcgccatggggatggggatggggggatacggc
ctcggcggccccatggggatggggatgggggactacggccttggcggcggcgaagacgac
gaggaggccatgaaggacctctacgccggcgcgggagcaggggatggggagggggaccac
cctcccgccgagttgaaggtcggggaggagcgggagatcgggacggaggggctcaagaag
aagctggtgaaggagggcgaggggtgggaacgccccggcgccggcgacgaggtccaagtg
cactacacggggacgctattggacggcaccaagttcgactccagcagagatcgcgactcc
acgttcaagttcacactgggccacggacaagttataaaaggatgggatttgggcatcaag
accatgaagaagggtgaaaatgctattttcactatcccaccagagcttgcatatggtgaa
gatggctccccaccagtcatccctccgaatgccactctgcagtttgatgttgagcttctt
tcatgggcgagtatcaaggacatttgcaaggatggaggcatcttaaagaaggtgctatct
gaaggagataaatgggagaacccaagagatcctgatgaagtttttgttaattatgaagca
aggcttgaggatggaactgtggtgtcaaaatccgatggggttgagttcactgtgaaagat
gggcttttctgccctgccatatcgaaggctgtcaagactatgaagaagaatgagaaggcc
ctccttactgtcaagccacagtatggctttggtgaacaaggaaggccagcctctggagag
gaagctgcagtgccgcctaattctacgttatgcattgaccttcaagtggtttcctggaaa
acagtaactgagataggcgatgacaaaaaggtccttaagaagatccttcaggagggtgaa
ggctatgatcgtcctaatgattgtgcaattgtcagagtgaaacttattggtaagttggcg
gatggtaccttgtttgtcaagaaaggtcatgatggtgaggagccatttgagttcaagact
gatgaagatcaagtgattgaagggcttgacaaagcagtacttagcatgaagaaaggtgaa
gtggccttggtgactattcctccccatcatgcctttggagctaatgaaacagctcaagat
ctggctgtagttccacctaactcatctgtttactatgaagtggagcttgtgtcatttgat
aaggaaaaagactcatgggatttgaaaaacaatactgagaagattgaagcagctgctaag
aagaaagatgaagggaatgtgtggtttaaagtgggcaagtatgccagagcttctaagaga
tataaaaaggctttgagcttcattgagtacgatagttccttcagcgaagaagagaagcaa
ctttcaaaaccacttaagataagctgcaagctcaacaatgctgcatgcaaactaaaactt
aaagactacaaggaagcgaaggaactgtgtactgaggttctggaacttgacagcacaaat
gtgaaggccttgtacagaagggcacaggcacacacctatcttgttgatcttgatttggca
gaggcagatatcaagaaagcactagaaatagatccagacaacagggatgtgaagatgggg
tacaggaggctgaaggagacagtcaaggagtacaaaagaagggatgccaaattgtatggc
aatatgatttcaaaactgagcaaggttgaagatacagaaggcaatgaccatgaaagtcag
gggcgaaccaagaagcgtggcctttggccattagcagcactgcttaggaagttcttcacc
gctgatggtaccaagggttccacgctgtggcttgtgctgaggctgttgattttggtgttt
ctagtggttgcaatttgtgtgggttactacatgcagagtggtgttcaggaaatagactgc
attaactgttga
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