Panicum virgatum (switchgrass): 120702354
Help
Entry
120702354 CDS
T07260
Name
(RefSeq) cell division control protein 48 homolog C-like
KO
K14571
ribosome biogenesis ATPase
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120702354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120702354
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
120702354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_14
AAA_22
Rad17
AAA_33
TIP49
AAA_16
AAA_2
AAA_28
AAA_17
RNA_helicase
nSTAND3
NPHP3_N
AAA_18
Vps4_C
ABC_tran
IstB_IS21
Mg_chelatase
Viral_helicase1
NACHT
NB-ARC
TsaE
Cytidylate_kin2
Bac_DnaA
NTPase_1
AAA_3
SKI
Parvo_NS1
AAA_11
Nucleolin_bd
tRNA_lig_kinase
Motif
Other DBs
NCBI-GeneID:
120702354
NCBI-ProteinID:
XP_039842050
LinkDB
All DBs
Position
4K:582275..590424
Genome browser
AA seq
754 aa
AA seq
DB search
MAKRPRHGGAGRSRLPPSLGKIRGYILNGGLAGASAEDVADTLRIRHPEFRRQKLDPFTA
LVRRVLSSIPSPSSSGSSASRRRHGAHATTSSSTSVSNEAAHPQPSPDNDVTKSLLRSQY
VACPQTPKRKPTANKQQLEIELAAEKARRLITSDGGASGDAKPDAAASEGIVREDKGPRF
ADLGGMEAVIEELMMEVVVPLCHPELPRRLGVRPVAGLLLHGPPGCGKTTLAHAIANETG
VPFYKISAPEVVSGVSGASEENIRGLFQKAYRTAPSIVFIDEIDAIASKRENLQREMERR
IVTQLMTCMDQFHQNIGAGSSDLDAESAEKKPGYVIVIGATNRPDAVDQALRRPGRFDRE
ISLGVPDENARKQILKMLTQSLRIEGEFDLFKIARATPGFVGADLKALVDKAGNLAMKKV
IDERKAQYSKHDWWRQPWDASEVEGLHITMDDFEEATKMVQPSLRREGFSSVPDVTWDDV
GGLDSLRKEFDRCIIRCIKHPEVYEVFGVNMQAGFLLFGPPGCGKTLIAKAVAHEAGANF
IHIKGPELLNKYVGESESEVRKIFTRARTNSPCILFFDEVDALTTKRGKEGGWVVERLLN
QLLIELDGADQRQGVYVIGATNRIDVIDDAVLRPGRFGKKLYVPLPNAEERVSILKAHAR
SKPISSDVDLAALAHREECNRLTGADLSSLVNEAAMAALGERLEFLLGNGTSSMSSSSLI
ELSHFEHALSKVKPSVSEQQIKHYEALSKRYSSN
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcgcccgcgtcacggcggcgctggccgctccagattgccgccctccttgggg
aagatccgcggctacatattgaacggcggcctagccggcgcctccgccgaggacgtcgcc
gacaccctccgcattcgccaccccgagttccgccgccagaagctcgaccctttcaccgcc
ttggtccgccgcgtcctctcctcgataccctccccctcctcctccggctcctccgcatcc
cgtcgccgccacggcgcccacgcgacgacctcctcctccacctccgtctccaacgaggcc
gctcacccgcagccgtcccccgacaacgatgtcaccaagtccttgctccgctcccagtac
gtcgcttgcccgcagacgcccaagcggaaacccaccgctaacaagcagcagctggagatt
gagttggctgcagagaaggcgcgccgcctcatcacgtccgatgggggcgccagcggagat
gctaagccggacgccgcagcctctgaaggaatcgtcagagaggacaaggggccgaggttc
gccgacctcggtgggatggaggcggtgatagaggagctgatgatggaagtggtcgtgccc
ctgtgccatccggagctgccgcggcgccttggggttaggcctgtagctgggctgctgcta
catggaccgcctggttgcggaaagaccacccttgcgcacgccattgccaatgagactggt
gtgccattctacaagatctcagccccggaagtcgtatctggggtatctggagcttctgag
gaaaacatcaggggcttgtttcagaaggcctataggactgctccctcgattgtattcatt
gatgaaatagatgcaattgcatccaagagggagaatctgcaacgagagatggagcgacgg
atagttactcaattaatgacatgcatggatcaattccaccagaatattggagccggcagc
agtgatttggatgcagaatcagctgaaaagaaacctggttatgttattgtcattggagcc
acaaataggcctgatgctgtggatcaagctctgcggcggccaggaaggtttgatcgagag
atatctcttggtgttccagatgagaatgcacggaaacagatacttaagatgcttactcag
agtctccgaattgaaggcgaatttgatttgttcaagatagctagggccacaccaggtttt
gttggtgcggacctgaaggcgttagtggacaaagcaggcaatctagcaatgaagaaagta
attgatgaaagaaaagctcagtacagcaagcatgactggtggagacaaccttgggatgcc
agtgaggtggagggcctacatattacaatggatgactttgaggaagcaacaaaaatggtt
caaccatccttgagaagagaagggttttcatctgtccctgatgtcacatgggatgatgtt
ggaggtcttgattcattaaggaaagagtttgaccgctgcattattcgatgtatcaagcat
cctgaagtttatgaggtgtttggagtgaatatgcaagctggcttcctgttgtttggacct
ccaggctgtgggaaaacactaattgcaaaagcagtggcccatgaggcaggggctaatttt
attcatatcaaggggcctgagctattgaacaagtatgttggggaaagtgaatcagaagtg
aggaaaatattcactcgtgcacgtacaaattccccatgcatcctatttttcgatgaggta
gatgctttgacaacaaagagagggaaagagggaggatgggttgttgaacgtctcctaaat
cagttacttattgaacttgatggtgctgatcaacggcaaggtgtctatgtgataggagct
acaaacagaatcgatgtgatagatgatgctgttctacggcctggtagatttgggaagaaa
ctttatgtacctttacctaatgcggaagagcgggtctcaatattaaaagcacatgctcga
agcaagcccatctcatctgatgtcgatttggctgcactggcacatcgtgaggaatgcaac
cgtctcactggagccgacctatcatcactggtcaatgaagcagcgatggcagcattgggg
gagagattggaattcctccttgggaatgggacatcgtcaatgagttcctcttctttgatc
gagctctcacacttcgaacatgcactatcaaaggttaagccatcagtatctgaacagcaa
attaaacactacgaggcattgtcaaagagatactcgtcaaactga
DBGET
integrated database retrieval system
