Panicum virgatum (switchgrass): 120702371
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Entry
120702371 CDS
T07260
Name
(RefSeq) cellulose synthase-like protein D2
KO
K20924
cellulose synthase-like protein [EC:2.4.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120702371
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120702371
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
zf-RING_4
zf-UDP
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
120702371
NCBI-ProteinID:
XP_039842077
LinkDB
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Position
4K:737630..742984
Genome browser
AA seq
1171 aa
AA seq
DB search
MASNGGGGLRHSNSSRLSRMSYSGEDGRGAQAPAADRPMVTFARRTHSGRYVSYSRDDLD
SELGGDFSPDHQEFHSYHVHIPATPDNQPMDPAISARVEEQYVSNSLFTGGFNSVTRAHL
MDKVIESEASHPQMAGAKGSSCAINGCDAKVMSDERGEDILPCECDFKICAECFGDAVKN
GGAVCPGCKEPYKNTELEDVVGGAAGARATLSLPPPPGAGGTAASRMERRLSIMRSQKAM
TRSQTGDWDHNRWLFETKGTYGYGNAIWPKENEVESGGGGGGGLGGADGQPAEFTTKPWR
PLTRKLSIPAGILSPYRLLILIRMAVLGLFLAWRIKHKNEDAMWLWGMSVVCELWFGFSW
LLDQLPKLCPVNRATDLAVLKDKFETPTPSNPTGRSDLPGLDIFVSTADPEKEPPLVTAN
TILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANMWVPFCRKHNIEPRNPESYF
NLKRDPYKNKVRPDFVKDRRRVKREYDEFKVRINGLPDSIRRRSDAYHAREEIKAMKRQR
EAALDDAVEPVKIPKATWMADGTHWPGTWIQPSAEHTRGDHAGIIQVMLKPPSDDPLYGS
PGEEDRPLDFTEVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRSSAVMSNGPFILNLD
CDHYVYNSQAFREGMCFMMDRGGDRIGYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALD
GLMGPVYVGTGCLFRRVALYGFDPPRTKEHGGCCSCCFPQRRKVKTSAAAPEETRALRMA
DFDEDEMNMSSFPKKFGNSNFLINSIPIAEFQGRPLADHPGVKNGRPPGALTVPRDLLDA
STVAEAISVISCWYEDKTEWGHRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRG
TAPINLTDRLHQVLRWATGSVEIFFSRNNALLASRKMKVLQRIAYLNVGIYPFTSIFLIV
YCFLPALSLFSGQFIVKQLNVTFLTYLLVITLTLCMLAVLEIKWSGISLEEWWRNEQFWL
IGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYTVKWTSLMIPPIVIM
MVNLIAIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVW
AGLLSITISLLWVAINPPSQNSQIGGSFTFP
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaacggcggcggcggcctccgccacagcaacagcagccgcctctcgcgcatg
tcctactccggcgaggacggccgcggcgcccaggcccccgccgccgaccgccccatggtc
accttcgcccgccgcactcactccggccgctacgtcagctactcccgcgacgacctcgac
agcgagctcggcggcgacttctcgcccgaccaccaggagttccacagctaccacgtccac
atcccggctacgcccgacaaccagcccatggaccccgccatctccgcccgcgtcgaggag
cagtacgtctccaactcgctcttcaccggcggcttcaacagcgtcacgcgcgcccacctc
atggacaaggtcatcgagtccgaggccagccacccgcagatggccggcgccaaggggtcc
tcctgtgccatcaacggatgcgacgccaaggtcatgagcgacgagcgcggcgaggacatc
ctcccctgcgagtgcgacttcaagatctgcgccgagtgcttcggcgacgccgtcaagaac
ggcggcgccgtctgccccggctgcaaggagccatacaagaacacagagctggaggatgtg
gttggcggcgcggctggggcgagggccaccctgtcgctgccaccgccgcctggtgccggt
ggcactgcagcgtccaggatggagaggcggctgtcgataatgcggtcgcagaaggcaatg
accaggagccagaccggggactgggatcacaaccgctggctctttgagacgaaagggaca
tatgggtatggcaatgcaatatggcccaaggagaatgaggtggagagcggtggtggtggt
ggaggcgggctaggtggagctgacggccagccggctgagttcaccaccaagccatggagg
ccgctcactcgcaagctttccatccctgctggcatccttagcccgtacagacttctcatt
ctgattcgtatggccgtccttggtctgttccttgcatggagaattaagcacaaaaatgag
gacgcaatgtggctgtggggcatgtctgttgtttgtgaactctggtttggcttttcatgg
ctactcgatcagttgccaaagttgtgccctgtgaaccgagcaaccgaccttgctgtcctg
aaagacaagtttgagactccaactccgtcgaaccctactggacgatcagatctaccaggg
cttgatatatttgtgtccactgctgatccagagaaagaacctccactggtcacagcaaac
actatcctctccatccttgctgctgattaccctgtggagaagctttcttgctatgtttct
gatgatggaggagctctcctgacatttgaagccatggctgaagctgcaagctttgccaac
atgtgggttcctttctgtcgcaagcacaacattgagcctcgcaatcctgagagctacttc
aacctgaagagggatccatacaagaacaaggtgcgtccggactttgtcaaggacagaagg
agggtgaagagggagtacgatgagttcaaggtcaggatcaatgggctgcctgattcaatc
cgccgtcgctctgatgcataccatgccagggaggaaatcaaggccatgaaaaggcagcga
gaggctgctcttgatgatgcagtggagcccgttaagatccctaaagccacctggatggct
gatggcacacattggcctggtacctggattcagccttccgctgagcatacccgtggtgac
catgctggaataattcaggtgatgttgaaacctcctagtgatgatcccttgtatggcagc
cctggtgaagaagacagacctcttgatttcactgaggttgacatccgtttgccaatgttg
gtgtacgtgtcccgagagaagcgccctggttacgaccacaacaagaaggctggtgcgatg
aatgccttggtccgttcatctgctgtgatgtcaaatggccccttcatcctcaatcttgac
tgcgaccactacgtttacaactcccaagctttccgtgaaggaatgtgcttcatgatggac
cgtggtggtgaccgtattggttatgtccagttcccgcagcggtttgagggcattgatcca
tctgatcggtatgctaaccacaacactgtcttctttgatgtcaacatgcgcgcactggat
ggtctcatgggaccagtctatgtgggcactggctgtcttttccgccgtgttgcactatat
ggatttgaccctccccgcaccaaggagcatggtggctgctgcagctgctgcttccctcag
agacgcaaggtcaaaacttcagctgctgcaccggaagagacccgggctctgcggatggca
gactttgatgaggatgaaatgaacatgtcatcattccccaagaagtttggtaactcgaac
ttcctcatcaactctattccaattgctgaattccaagggcgtcctctggccgatcaccct
ggtgtcaagaatggccgccctccaggtgctctcactgtgccccgcgaccttcttgatgcc
tccacagttgctgaggccatcagtgtcatctcatgctggtatgaagacaagactgagtgg
ggccaccgtgttggttggatttatggttcagtcacagaggatgtggttactgggtaccgg
atgcacaaccgtggatggaaatctgtgtactgtgtcaccaagcgtgatgctttccgtggc
actgcaccaattaatctcactgaccggctccaccaggtgctccgatgggctactggttca
gtggaaatcttcttctcccgcaacaacgctctgctcgcaagccgcaagatgaaggttctt
cagaggatcgcgtacctgaatgtgggcatctacccattcacatcaatcttcctcattgtc
tactgcttcctgccagcgctgtccctcttctctgggcagttcattgtgaagcaactcaac
gtgaccttcctgacatacctgctggtgatcaccctaactctgtgcatgcttgcggtgctg
gagattaagtggtcagggatcagcctggaggaatggtggaggaacgagcagttctggctg
atcggaggaacgagcgcccatcttgccgctgtgctgcagggccttctgaaggtgattgcc
ggcatcgagatctccttcacactgacatccaagtcaggcggtgatgatgtggacgacgag
tttgcagacctgtacaccgtgaagtggacgtcgctgatgatcccgccgatcgtgatcatg
atggtgaacctgatcgccatcgcggtggggttcagccggaccatctacagcgagatcccg
cagtggagcaagctcctgggtggcgtgttcttcagcttctgggtgctggcccacctgtac
ccgttcgctaaggggctgatggggcggaggggccggacgccgaccatcgtcttcgtctgg
gccggcctcttgtccatcaccatctcgctgctgtgggtggccatcaacccgccctcgcag
aattcccagatcggtgggtcgttcacgttcccgtga
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