Panicum virgatum (switchgrass): 120702384
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Entry
120702384 CDS
T07260
Name
(RefSeq) galacturonosyltransferase 8-like
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120702384
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120702384
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
120702384
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120702384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
120702384
NCBI-ProteinID:
XP_039842104
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Position
1K:complement(30475183..30478322)
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AA seq
529 aa
AA seq
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MAAAAGSPWRSAGPVAALALLLLLAAAPAAAAGGSAAVNGDRLRAEQIRKQASDAAASAA
ALAAASRRLHLDRARHLRLLSSLHRNLTNTLRALSLAADSDPSASDPAAADANASSPRQL
DLQAKDLIRAARAAIAESKPLFDPQLKIQRLKDAIFAQNELLARAKKRGAFASLIAAKSI
PKPLHCLAVRLTAERIARPEQYADPVPPPRALEDPALFHYAIFSDNVLAASCVVRSAVAN
SNDPSKHVFHVVTDRMNLGAMQVIIRRMDLKGAHYEVKAFEDYKFLNSSYVPVLRQLESA
NLQKFYFENKLENATKDASNMKFRNPKYLSMLNHLRFYLPEMYPKLHRILFLDDDVVVQR
DLTGLWKIDMDGKVNGAVETCFGSFHRYWQYMNFSHPLIKAKFSPNACGWAYGMNFFDLD
SWRREKCTEQYHYWQNQNENRTLWKLGTLPPGLITFYSTTKPLDKSWHVLGLGYNPSISM
EEIRNAAVVHFNGNMKPWLDIGMNQFRHLWTKYVDYDDEYIRQCNFAPP
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgcggccgggagcccttggcgcagcgccggacccgtcgcggccctcgccctc
ctcctactactcgccgccgcgcccgcggccgccgccggcgggtccgcggccgtgaacggg
gaccgcctccgggcggagcagatccggaagcaggcctcggacgccgccgcctcggccgcc
gcgctcgccgcggcgtcgcgccgcctccacctcgaccgcgcgcgccacctccgcctcctc
tcctcgcttcaccggaacctcaccaacacgctccgcgccctctcgctcgcggccgactcg
gacccctccgcctccgaccccgccgctgctgacgccaacgcctcgtccccccgccagctc
gacctccaggccaaggacctgatccgcgccgcgcgcgccgccatcgccgaatccaagccg
ctcttcgacccgcagctcaagatccagcgcctcaaggacgccatcttcgcgcagaacgag
ctgctcgcgcgcgccaagaagcgcggcgccttcgcctccctcatcgctgccaagtccatc
cccaagccgctccactgcctcgccgtccgcctcaccgccgagcggatcgcgaggcccgag
cagtacgcggacccggtgccgccgccgcgggcgctcgaggaccccgcgctcttccactac
gccatcttctctgacaacgtgctcgcggcctcatgcgtcgtgcgctccgccgtcgccaac
tccaacgacccctccaagcacgtcttccatgttgtcaccgatcggatgaacctcggtgcc
atgcaggtgataatacgccgaatggacttaaaaggtgcacactatgaggttaaagcattt
gaggattacaaatttctgaactcctcatatgtccctgtgctccggcaactggagtctgca
aaccttcaaaaattctattttgagaacaagcttgagaatgccaccaaagatgctagcaat
atgaaattcagaaatcccaagtatctatctatgctcaatcacttgcgattctatttgccg
gagatgtacccgaagctgcaccgtattcttttcttggacgatgatgttgtggtacagagg
gatcttacaggactgtggaagattgacatggatgggaaagtgaatggagcagtagaaacg
tgctttgggtcttttcatcggtattggcagtacatgaacttctcacatccccttatcaaa
gcaaagtttagtcctaatgcctgtggatgggcatatggcatgaacttctttgatcttgat
tcttggaggagggagaagtgtactgagcagtaccattactggcagaatcagaatgagaac
cggacattatggaagctaggaacgctgcccccaggcttaatcacattctactccaccacg
aagcctctggacaaatcctggcatgttcttgggcttgggtacaatccaagcatcagcatg
gaggagatcaggaatgctgctgttgtgcatttcaatggtaatatgaagccgtggctggac
atcggtatgaaccagttcaggcacctttggacaaagtacgtggactacgatgacgaatat
attcgtcaatgcaattttgcaccaccatag
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