Panicum virgatum (switchgrass): 120702444
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Entry
120702444 CDS
T07260
Name
(RefSeq) E3 ubiquitin ligase BIG BROTHER-related-like
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120702444
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120702444
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120702444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8
zf-RING_16
zf-RING_Vps41
zf-C3H2C3
RINGv
zf-C3HC4_4
zf_RING_Vps8_fungal
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
120702444
NCBI-ProteinID:
XP_039842180
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All DBs
Position
4K:1622071..1624700
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AA seq
255 aa
AA seq
DB search
MATVGQPGALRRITVHYANSPTRSTGDADLDDLDDDLLQFVLADLLPGQEGLHQSILEEA
SSNQNHMRGAPSDNSQSQHYHGESSTAAAAAATASGTSGTEEQIASDFEYAKRLQEMEDL
SIEDDDISCVPSPSDSDDDHDHNDEEADRQDGNDDDPDNMTYEQRQALVEAVGTEDRGLP
DELISYLHTWTYKASGFFSRKTNHEDCPICLSTFRHRESMITLPCKHYYHAACVTRWLKV
NKTCPVCKYEPFGPC
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgtggggcagcctggcgccctgagaaggatcaccgtgcactacgccaactcg
cccacgcgcagcacgggagacgcggaccttgacgacctagacgacgacctgctccagttt
gtgcttgctgatcttcttcctggccaggagggtctgcaccaatcgatcttggaagaagca
tccagcaaccaaaaccacatgagaggtgccccatccgataattcacagtcacagcactac
catggggagagcagcactgctgcagctgcagcagcgactgcttccggaacttcaggaacg
gaagaacagatcgcctcggactttgagtacgccaagcggctgcaggagatggaggacctg
agcatcgaggatgacgatatcagttgcgtgccctctccatcagactctgacgatgaccat
gaccataacgacgaagaggctgacaggcaggatggtaatgatgacgatccagacaacatg
acttatgagcaaaggcaagcactcgtggaagctgtggggactgaggacagaggtttacct
gatgagctcatctcctatctgcatacatggacgtacaaggcttcagggtttttctccagg
aagacaaaccatgaagactgccctatctgcctgtctactttcagacaccgagaaagtatg
ataacattgccgtgcaagcattactaccacgcagcttgtgtcaccagatggctcaaggtc
aataagacctgcccagtctgcaaatatgaaccgtttggaccttgctag
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integrated database retrieval system
