KEGG   Panicum virgatum (switchgrass): 120702457
Entry
120702457         CDS       T07260                                 
Name
(RefSeq) LIMR family protein Os06g0128200
  KO
K14617  LMBR1 domain-containing protein 1
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04977  Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09150 Organismal Systems
  09154 Digestive system
   04977 Vitamin digestion and absorption
    120702457
   04980 Cobalamin transport and metabolism
    120702457
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvir04131]
    120702457
Membrane trafficking [BR:pvir04131]
 Endosome - Lysosome transport
  Others
   Lysosomal membrane proteins
    120702457
SSDB
Motif
Pfam: LMBR1 DUF7801 DUF2981
Other DBs
NCBI-GeneID: 120702457
NCBI-ProteinID: XP_039842197
LinkDB
Position
4K:complement(1901606..1906737)
AA seq 510 aa
MGDFNLALVIVAVVVSVLVLLVSVYLLVNYQHPDDANQAYFPKLVVVLGLTVAVLSILML
PADVANRQACRKAVYNGACSLTLPMKTLWLVVYIVDAVLVFLVIPFAMFYYEGDQDKSVG
KRLRTALIWVVASAVVCGLVLGILYGLVGKVDFTVRHLSSSVETFPNSFSGFSSGQPCIS
SLPRQCAASTAPSSSLTTWTMRATFPEYVVALTTIVGSVLFTIFGGVGIACLPLGLIFSF
VRRPKAVITRSQYIKEATELGKKARELKKAAEALHQEERSGNKGRKWRKNVKAVEKELLL
LEDDMKALEEMYPQGEKAETTWALTVLGYIGKLIFGVVGLIISIAWVAHIVIYLLIDPPL
SSFLNEVFIKLDDVWGLLGTAAFAFFCFYLLIAVIAGEMMLGLKLVFITIHPMKWGGTLM
NSFLFNVGLILLCSISVIQFCATAFAYYAQATAAQEIFGHTLQSLRGIKYLYKYNIFQYG
FVALAILTLFYYAIFGWRKRKPTGRFQISN
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgggggacttcaacctggcgctggtgatcgtggcggtggtggtcagcgtgctcgtgctg
ctcgtcagcgtctacctgctcgtcaactaccagcaccccgacgacgccaaccaggcctac
ttccccaagctcgtcgtcgtgctcggcctcaccgtcgccgtcctctccatcctcatgctc
cccgccgacgtcgccaaccgccaggcctgccggaaggccgtctacaacggcgcctgcagc
ctcacgctccccatgaagacgctctggctcgtcgtctacatcgtcgacgccgtcctcgtc
ttcctcgtcatacccttcgcgatgttctactacgagggcgaccaggacaagtctgtgggg
aagaggctcaggaccgcgctcatatgggtcgttgcgtccgcggtggtttgtggccttgta
cttggcatcctatacggacttgttggtaaagtggacttcaccgtcaggcacctatcttca
tcagtcgagacgtttccaaactcattttctggattctcaagcggtcagccttgcatcagt
tcattgcctcgtcagtgtgcggcttctacggcaccttcaagctctttaacaacttggaca
atgcgtgctaccttccctgaatatgtcgttgctcttactactatcgttggatctgtgctt
ttcaccatatttggtggtgttggcattgcttgccttccattaggacttatattctcattt
gtccggcgtccaaaagctgtcattacacgctcacaatatataaaggaagcaactgaattg
ggaaagaaggccagagaattgaagaaagcagctgaagcccttcaccaagaagagagaagc
gggaacaagggcaggaaatggcgcaaaaatgtgaaggctgtggaaaaggagttattactt
ctggaagatgacatgaaggctctggaggagatgtatcctcaaggagaaaaggctgagact
acttgggcattgacagtccttgggtacattggaaaacttatatttggtgttgtcgggtta
atcatatcgatagcttgggttgcacatatcgtcatatacttgctgattgatcctcctcta
tcgtcattcctaaatgaagtcttcataaagttggacgatgtttggggtctgcttgggact
gctgccttcgcgttcttctgcttctatctccttattgcagtgattgctggggagatgatg
cttggcttgaaactagttttcatcaccattcatccgatgaaatggggaggcactttaatg
aactccttcctgtttaatgttggactcattctactttgctccatcagtgtgattcagttc
tgtgccacagcttttgcctactatgcacaagcaactgctgctcaggagatcttcggccac
acattgcaatctcttcgtggaattaagtacctttacaagtacaacattttccagtatggc
tttgttgctcttgccatactcacgctcttttactatgcgatatttggatggcgaaagagg
aaaccaacaggaaggttccagatctcaaattga

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