Panicum virgatum (switchgrass): 120702474
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Entry
120702474 CDS
T07260
Name
(RefSeq) LRR receptor-like serine/threonine-protein kinase SIK1
KO
K20718
LRR receptor-like serine/threonine-protein kinase ERECTA [EC:
2.7.11.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
120702474
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pvir01001
]
120702474
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120702474
Protein kinases [BR:
pvir01001
]
Serine/threonine kinases: TKL group
IRAK family
120702474
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_1
LRR_8
Pkinase
PK_Tyr_Ser-Thr
LRR_14
LRR_4
LRR_LRWD1
LRR_ComC
LRRNT_2
LRR_Zer-1
LRR_6
ABC1
LRR_NXF1-5
Pkinase_fungal
APH
Motif
Other DBs
NCBI-GeneID:
120702474
NCBI-ProteinID:
XP_039842222
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All DBs
Position
4K:2055355..2062496
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AA seq
983 aa
AA seq
DB search
MALLPWWWSAAAAVLVLAAVAAEVEAGGGGGGEGDGRALMAVKAGFGNAANALVDWDGGR
DHCAWRGVACDTASFAVVGLNLSNLNLGGEISPAIGELKSLQFVDLKLNKLTGQIPDEIG
DCVSLKYLDLSGNLLYGDIPFSISKLKQLEDLILKNNQLTGPIPSTLSQIPNLKTLDLAQ
NKLTGDIPRLIYWNEVLQYLGLRGNSLTGTLSPDMCQLTGLWYFDVRGNNLTGTIPEGIG
NCTSFEILDISYNQISGEIPYNIGYLQVATLSLQGNRLTGRIPEVIGLMQALAVLDLSEN
ELVGPIPPILGNLSYTGKLYLHGNKLTGHIPPELGNMSKLSYLQLNDNELEGTIPAELGK
LTELFELNLANNNLEGHIPANISSCSALNKFNVYGNRLNGSIPGGFQKLESLTYLNLSSN
NFKGQIPSELGHIVNLDTLDLSYNEFSGPVPPTIGDLEHLLELNLSKNHLIGSVPAEFGN
LRSVQVIDISSNNLSGYLPEELGQLQNLDSLILSNNNLVGEIPAQLANCFSLITLNLSYN
NFSGYVPSAKNFSKFPMDSFVGNPMLHVYCQDSICGHSHGTKVNISRTAVACIILGFIIL
LCIMLLAVYKTNKPLPPEKGSDKPVQGPPKLVVLQMDMASHTYEEIMRLTENFSEKYIIG
YGASSTVYKCDLKSGKAIAVKRLYSQYNHSLREFETELETIGSIRHRNLVSLHGFSLSPH
GNLLFYDYMENGSLWDLLHGPSKKVKLDWDTRLKIAVGAAQGLAYLHHDCNPRIVHRDVK
SSNILLDENFEAHLSDFGIAKCVPAAKSHASTYVLGTIGYIDPEYARTSRLNEKSDVYSF
GIVLLELLTGKKAVDNESNLHQLILSKADDNTVMEAVDSEVSVTCTDMNLVRKAFQLALL
CTKRHPADRPTMHEVARVLLSLLPAPAVKPPTTKGTAGDYTRFLATTTADMKHDVSDDIG
DNSSSDEQWFVRFGEVISKHTMS
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgctgccgtggtggtggtcggcggcggcggcggtgctggttcttgcggcggtg
gcggcggaggttgaggccggaggaggaggaggaggcgaaggggatgggcgggcgctgatg
gcggtgaaggccgggttcgggaacgcggccaacgcgctcgtggactgggacggcggccgc
gaccactgcgcctggcgcggggtcgcctgcgacaccgcctccttcgccgtcgtcggcctg
aacctgtcaaatctaaacctaggaggggagatctcgccggctataggggagctcaagagc
ctacagttcgtggatctcaagctgaacaagctcacaggccaaatcccagatgagattggg
gattgtgtctccttaaaatatctggatttgtctgggaacttgctgtatggagacatcccc
ttctccatctccaagctcaagcagcttgaggacctgattttgaagaataaccaactcacg
ggacccatcccttccacgctgtcccagattccaaatctcaagaccttggatctagctcag
aacaaacttaccggtgacatcccgaggctcatctactggaacgaagtactgcagtaccta
ggcttgaggggtaactcactgactggaactttgtcacctgatatgtgccaactgactggc
ctgtggtactttgatgtaagggggaacaatctcacaggaaccattccagagggcataggg
aactgcactagctttgagattctggatatttcatacaaccaaatctctggagaaatacct
tacaacataggataccttcaagtagccacactgtcacttcaaggaaatagactgactggg
agaattccagaagtgattggcctcatgcaggctcttgctgtcctagacctgagcgagaat
gaactggtagggccgattcctcctatacttggcaacctatcatacactggcaaactctat
ttacatggcaacaaacttactggacacataccaccagaactggggaacatgagtaaactt
agctacttgcagctgaacgataatgaactagaaggcaccattccagctgagcttggcaag
ctcacagaattatttgaattaaatcttgccaacaacaatcttgagggtcatattcctgca
aacatcagttcttgcagtgcactgaacaaattcaatgtgtatggcaatagactgaatggc
tctatccctggtggtttccagaagttggagagcttgacatacctgaacctttcttcaaac
aatttcaaaggccagattccctctgaacttggccacatagtcaacttggacacactggat
ctttcctacaatgaattctctggaccagttcctcccactattggtgatctcgagcatctt
cttgaactgaatttgagtaaaaaccatcttattggatctgtgcctgctgaatttggaaac
ttgagaagcgtccaagtaatcgacatatccagtaacaacttgtccggttatctccctgaa
gaacttggacagttgcagaaccttgatagcttgattcttagcaacaacaatttggttggg
gagatccctgctcagctggctaactgcttcagcttaattaccttgaatttgtcatacaac
aacttttctggatacgtcccatcagcaaagaatttctcaaaattcccaatggatagcttt
gtgggtaaccctatgctccacgtgtactgccaagactccatctgtggacattctcatgga
acaaaagttaatatttctcggacagcagttgcttgcattattttaggcttcatcatatta
ctctgcattatgctgctggcagtatacaagacaaataaaccacttccacctgagaaagga
tctgacaagccagtgcaaggaccaccaaaactagtagtccttcaaatggacatggcttcc
catacctatgaagaaattatgaggttgactgagaattttagtgagaaatacatcattggt
tatggcgcatcaagtactgtgtacaaatgtgatctcaagagcggcaaggctattgctgtc
aaacggctttacagtcagtataaccacagcctccgtgagtttgagacagagctggagaca
atcggtagcatccgacacaggaatcttgtcagccttcatggcttctcactctctcctcat
ggaaacctgctcttctatgattacatggaaaatggttccctgtgggatcttcttcatggt
ccatcaaagaaagtgaagcttgattgggacacaaggctgaagatcgcagtgggtgctgcg
caaggactggcctatcttcaccatgactgcaaccctcgcatagtccacagggatgtcaag
tcctcaaacatcctgctcgatgagaactttgaagcgcacctctctgatttcggcattgcc
aaatgtgttccggctgccaagtcccatgcctccacctacgttctgggaaccatcggctac
attgatccagagtatgcccggacgtcaaggctcaatgagaaatctgatgtctacagcttt
ggcatagtccttctggagctgctcactgggaaaaaggccgtcgacaatgaatccaacttg
catcaattgatactctcaaaggctgatgacaacacggtgatggaggctgtggactcggag
gtttcggtgacgtgcacggacatgaacctggtccgcaaggccttccagctcgccctgctg
tgcaccaagcggcaccccgccgaccgtccgaccatgcacgaggtcgcgagggtgctgctc
tccctcctgccggcacccgccgtgaagcctcccacgaccaaggggacggccggcgactac
acccgcttcctggcgacgaccacggccgacatgaagcacgacgtgtccgacgacatcggc
gacaacagctcctccgacgagcagtggttcgtgcggttcggcgaggtcatatcgaagcac
acaatgtcatga
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