Panicum virgatum (switchgrass): 120702535
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Entry
120702535 CDS
T07260
Name
(RefSeq) GDP-mannose 4,6 dehydratase 1-like
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00051
Fructose and mannose metabolism
pvir00541
Biosynthesis of various nucleotide sugars
pvir01100
Metabolic pathways
pvir01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
120702535
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
120702535
Enzymes [BR:
pvir01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
120702535
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
Glyco_transf_4
NmrA
NAD_binding_10
Motif
Other DBs
NCBI-GeneID:
120702535
NCBI-ProteinID:
XP_039842324
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Position
4K:2950321..2951760
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AA seq
373 aa
AA seq
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MAHSNGAAAGGGGGGGEAAPVPRPLAPARKAALITGITGQDGSYLTELLLSKGYEVHGLI
RRSSNFNTQRLDHIYHDPHAVPSAPRPPMRLHYADLSDSSSLRRALDAIAPDEVYNLAAQ
SHVAVSFEIPDYTADVTATGALRLLEAVRLARKPMRYYQAGSSEMFGSTPPPQSEDTPFH
PRSPYAAAKVAAHWYTVNYREAYGLFACNGVLFNHESPRRGENFVTRKITRAVGRIKVGL
QTKVFLGNLSAARDWGFAGDYVEAMWLMLQQDQPGDYVVATEESHTVEEFLQAAFGYAGL
NWKDHVVIDKKYFRPAEVDSLKGDSTKARRVLKWKPKVGFQQLVEMMVDHDIELAKKEKV
LVDAGYRDPKQQP
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggcgcactccaacggcgccgccgccggcggcggcggcggcggcggcgaggccgccccg
gtgccgcggcccctcgcgccagcgcggaaggcagcgctgatcacgggcatcacggggcag
gacgggagctacctgacggagctgctcctctccaaggggtacgaggtgcacggcctcatc
cgccgctcctccaacttcaacacgcagcggctggaccacatctaccacgacccgcacgcc
gtgccctcggccccgcgcccgccgatgcgcctccactacgccgacctctccgactcctcc
tcgctccgccgcgcgctcgacgccatcgcccccgacgaggtctacaacctcgccgcgcag
tcgcacgtcgccgtctctttcgagatccccgactacaccgccgacgtcaccgccacgggc
gcgctgcgcctcctcgaggccgtccgcctcgcgcgcaagcccatgcgctactaccaggcc
ggctcctcggagatgttcggctccacgccgccgccgcagagcgaggacacgccgttccac
ccgcgctcgccctacgccgccgccaaggtcgccgcgcactggtacaccgtcaactaccgc
gaggcctacggtctcttcgcctgcaacggcgtgctcttcaaccacgagtccccgcgccgc
ggggagaacttcgtcacgcgcaagatcacgcgcgccgtcggccgcatcaaggtcggcctg
cagactaaggtcttcctcggaaacctctccgccgccagggactggggattcgccggggac
tacgtcgaggcaatgtggctcatgctgcagcaggaccagccaggtgactacgtcgtcgcc
actgaggagtcccacaccgtagaggagttcttgcaggctgccttcgggtatgccgggctc
aactggaaggaccatgtggtcattgacaagaagtacttccggccggcggaggtcgacagc
cttaaaggggactcgaccaaggcgaggagggtgctcaaatggaagcccaaggttgggttc
cagcagctcgttgagatgatggttgatcatgacattgagctcgctaagaaggagaaggtg
ctggtggatgctggttaccgtgatcccaagcagcagccttag
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