KEGG   Panicum virgatum (switchgrass): 120702541
Entry
120702541         CDS       T07260                                 
Name
(RefSeq) RNA demethylase ALKBH9B-like
  KO
K10767  mRNA N6-methyladenine demethylase [EC:1.14.11.53]
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvir03019]
    120702541
Enzymes [BR:pvir01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.53  mRNA N6-methyladenine demethylase
     120702541
Messenger RNA biogenesis [BR:pvir03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     120702541
SSDB
Motif
Pfam: 2OG-FeII_Oxy_2 DUF3292
Other DBs
NCBI-GeneID: 120702541
NCBI-ProteinID: XP_039842333
LinkDB
Position
4K:3028819..3034024
AA seq 609 aa
MAMAPSSSSGGGGGGGDPMALVQGYTGEELAIAGEFLTTWLPFLSAGLCPSCVESLRGRV
DSLLPRDEESPRTPTLQIDQIEATGWDSDPAPQKHPPFEPSGWDSDPPPPPPQQQQQPAP
APAEKPRMSWADMAQEDELAAAAEEDTAAAAADDGEEGGEVGRPKVQLTRDQREQRRFKN
VVRKKDYICLERVNGRLVNILEGLELHAGVFSSAEQRRIVECVYDLQERGRRGELGDRTY
TEPQKWMRGKGRVTIQFGCCYNYATDKNGNPPGIIQTIVSDPMPDLFKTMIKRLVRWQVL
PPTCVPDSCIVNIYEPADCIPPHIDSHDFVRPFCTVSFLSECNILFGSNLRASAPGEFTG
SIAIPLPVGSVLVLNGNGADVAKHCVPAVPTKRISITFRKMDPAKRPFNFKDDPELLNLT
PLGTVVQEAGRSSNESRSKLPDAQITNLSKLSRGKRSKGRTSAGKVGSGILGDQPPAVEV
LSRQSLHGQRPVSASSAERERNSGRWSREPRYQSNALGMQAQVDDIREWPHPLAQERRHG
NGINSSEDGVESVERRPRVEHRQISLINRTINDDMEPLSISSRESGDQPHANTRPLYNKP
RRTRVSLDD
NT seq 1830 nt   +upstreamnt  +downstreamnt
atggccatggcgccctcctcctcctccggtggcggcggcggcgggggcgacccgatggcg
ctcgtgcaggggtacacgggcgaggagctggccatcgcgggggagttcctcaccacatgg
ctccccttcctctccgcgggcctctgcccctcctgcgtcgagtcgctccgcggccgcgtc
gactccttgctcccgcgagatgaggaatcgccgcggacgccgacgcttcagatcgatcag
attgaggcgacggggtgggactccgatcccgcgccccagaagcatccgcctttcgagccc
agcggatgggattcggatccgccgccgccgccgccgcagcagcagcagcagccggcgccg
gcgccggcggagaagccgaggatgtcgtgggcggacatggcgcaggaggacgagctggcc
gcggcggcggaggaggacacggcggccgcggcggctgatgacggggaggaggggggcgag
gttgggaggcccaaggtgcagctgacgagggaccagcgggaacagaggaggttcaagaac
gtggtgcggaagaaggattacatctgcctcgagagggttaatggccgcctcgtcaacatc
cttgagggccttgagcttcatgctggtgtgttcagctcagctgagcagcggcgcattgtc
gaatgcgtgtatgacctccaggagaggggcaggcgtggggagctcggagatcgcacatac
actgaaccccaaaaatggatgcgtggtaaaggccgggtaacaatccaatttggatgctgt
tacaattatgctacggataagaacggaaatccaccaggcattatacagaccattgtttct
gatccaatgcctgatctctttaagactatgattaagagattggtacgatggcaagttctg
ccgccgacttgtgtgccagacagctgcattgtaaatatatatgaacctgcagattgcatc
ccaccacatatagatagccatgattttgttcggccattttgtaccgtttctttcctcagc
gaatgcaacattctttttggatctaacctgagagcttctgcccctggagaattcactggt
tcaattgcgatccctctccctgtcgggtctgtgcttgtcctgaacggcaatggtgctgat
gtagcaaagcattgtgttccagctgtcccgaccaaaaggatatccattaccttcagaaaa
atggacccagcaaagcgtccattcaattttaaagatgatccagaactgcttaaccttaca
cctctagggacagttgtgcaagaagctggcagatcatcaaatgaaagcaggagcaagcta
cctgatgcccaaataacaaatctgagcaaactatccagaggcaagaggtctaaaggaaga
acatctgctgggaaagttggaagcggcattcttggagaccaacctcctgcagtagaagtt
ctgtcacggcaaagtctgcatggccagcgccctgtctctgcatcaagtgcagagagagaa
aggaactctggcaggtggtcaagggaaccgagatatcaatctaatgctcttggcatgcag
gctcaggtggatgatatcagagagtggccacatccgttggcacaagagagacggcatggc
aatggcattaattccagtgaagatggtgttgaatctgtggaaaggagaccacgggtggag
catagacagatctcgttgatcaaccgaacaataaatgatgacatggagcctctttcaatc
tcaagccgtgaatcaggtgaccagcctcatgctaacacgcgacccttgtataacaagcca
aggaggaccagagtaagcctggatgactga

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