KEGG   Panicum virgatum (switchgrass): 120702602
Entry
120702602         CDS       T07260                                 
Name
(RefSeq) glutamate--tRNA ligase, chloroplastic/mitochondrial-like
  KO
K01885  glutamyl-tRNA synthetase [EC:6.1.1.17]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir00860  Porphyrin metabolism
pvir00970  Aminoacyl-tRNA biosynthesis
pvir01100  Metabolic pathways
pvir01110  Biosynthesis of secondary metabolites
pvir01240  Biosynthesis of cofactors
Module
pvir_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    120702602
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    120702602
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:pvir01007]
    120702602
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pvir03016]
    120702602
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pvir02048]
    120702602
Enzymes [BR:pvir01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.17  glutamate---tRNA ligase
     120702602
Amino acid related enzymes [BR:pvir01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   120702602
Transfer RNA biogenesis [BR:pvir03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    120702602
 Prokaryotic type
   Other AARSs
    120702602
Prokaryotic defense system [BR:pvir02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    120702602
SSDB
Motif
Pfam: tRNA-synt_1c Anticodon_2
Other DBs
NCBI-GeneID: 120702602
NCBI-ProteinID: XP_039842426
LinkDB
Position
1K:complement(1706986..1712963)
AA seq 567 aa
MAATALLAGSPWLRLRLRADAPARRPFARHTHLRRALSSCARASAADPASGPVRVRFAPS
PTGNLHVGGARTALFNYLFARSNGGRFVLRVEDTDLERSTRKSEEAVLADLAWLGLQWDE
GPDVGGEFGPYRQSERNSLYKDYAEKLLDSGAVYRCFCSNEELEQMKEVAKQRQLPPVYM
GKWATASDVEVEQELEKGTPYTYRFRVPKEGSLKINDLIRGEVSWNLDTLGDFVIMRSNG
QPVYNFCVTVDDATMQISHVIRAEEHLPNTLRQALIYKALGFPMPSFAHVSLILAPDKSK
LSKRHGATSVGQYKEMGYLPQAMVNYLALLGWGDGTENEFFTINDLVEKFTINRVNKSGA
VFDATKLKWMNGQHLRSFPTDELIKAFEDRWKDTGILQESESGFAKEAAELLKDGIDLIT
EADAALTNLLSYPLHATLSSDEAKPVVQDKISEVALGLISAYDSGELTQALAEGRDGWQK
WVKGFGKSLKRKGKGLFMPLRVLLTGKLHGPDMGASIALIHKAGICGAVTPQSNFITLDE
RFRILKEVDWESVVEESPSESAIPAAS
NT seq 1704 nt   +upstreamnt  +downstreamnt
atggcggcgaccgcgctgctggcgggctcgccgtggctgcgcctccgcctccgcgcggac
gctcccgcgcgccgccccttcgcccgccacactcacctccgccgggccctctcctcctgc
gcccgcgcctccgccgccgaccccgcctccggccccgtccgcgtccgcttcgcgccgtcg
cccacgggcaacctccacgtcggcggcgcccgcaccgcgctcttcaactacctcttcgcg
cgctccaacggcggccgcttcgtgctccgcgtcgaggacaccgacctcgagcgctccacc
aggaagtccgaggaggccgtcctcgccgacctcgcgtggctcggcctccagtgggacgaa
ggtcccgatgttggcggggagtttgggccttatcgccagtcagagcggaattcactgtac
aaggattacgccgagaagcttttagactccggcgcggtttaccgctgcttttgctccaat
gaggaacttgagcaaatgaaggaagtcgcaaagcagaggcaacttcctcctgtgtacatg
ggcaagtgggcaactgcttcagacgttgaagtggagcaggagctagagaaagggacacca
tacacttaccggtttcgtgtgccaaaggaagggtcattgaaaattaatgaccttattcgt
ggcgaggtcagttggaatctagacacgcttggtgattttgtgattatgagaagcaatgga
caacctgtctataacttctgtgtgacagttgacgatgctaccatgcaaatctctcatgtt
attagagctgaagagcatttaccaaacacactgcgccaagctctaatttataaagctctt
ggattcccgatgccttcatttgcccatgtgtcacttattctggctcctgacaaaagcaaa
ctgtcaaaacgtcatggtgctacttctgtggggcagtataaagagatgggctatctacct
caggcaatggtaaattatttagcactattgggctggggtgatgggactgaaaatgagttc
ttcactatcaatgatctagttgaaaagttcactatcaatcgtgtcaataaaagcggagca
gtttttgatgcaacaaaattaaaatggatgaatggacaacatctaagatcatttccaaca
gatgaactcatcaaggcttttgaagatcggtggaaggacaccggcattctccaggagtct
gaaagtggttttgcaaaggaagctgccgagcttttgaaggatggtattgatctgataaca
gaggctgatgcagctcttacaaatttgttgtcgtatccccttcacgccactttaagcagt
gatgaagctaaacctgtggtgcaagacaagatttctgaggttgctttgggtcttatttct
gcgtacgatagcggtgaacttactcaagcactagctgagggccgtgatggttggcagaag
tgggtgaaaggttttggaaagtctctcaaaagaaagggcaaagggctctttatgccgctc
cgagtactgttgacggggaagcttcatggtcctgacatgggtgccagcatagctcttata
cacaaagctggcatctgtggagcggtgacgcctcagtcgaatttcataaccctagacgag
cggttcaggatcctcaaggaggtcgactgggagtcggtggtggaggagtccccctcagaa
tcagccatccccgctgcttcatag

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