KEGG   Panicum virgatum (switchgrass): 120702678
Entry
120702678         CDS       T07260                                 
Name
(RefSeq) DNA-damage-repair/toleration protein DRT111, chloroplastic-like
  KO
K12840  splicing factor 45
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120702678
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pvir03041]
    120702678
Spliceosome [BR:pvir03041]
 Complex A
  U2 snRNP components
   U2 related factors
    120702678
 Complex B
    120702678
SSDB
Motif
Pfam: G-patch RRM_1 G-patch_2
Other DBs
NCBI-GeneID: 120702678
NCBI-ProteinID: XP_039842503
LinkDB
Position
4K:4644347..4647053
AA seq 396 aa
MLGGLYGDLPPPSSAGEDDKTSTASVWSSATKMAPPTLRKPSTTFAPPPSLLRNQHLLPP
KAASASASASASAAPATAPPVVAAEPAPAPSFQPAFVAVQSTVLEEYDPARPNDYEDYRK
DKLRRAKEAELSKELERRRREEQEREREREQREREAREREERDFQSRASSLNISGEEAWK
RRAAMSGGAGAAAAQRTPSSPPHGDGFAIGSSSSAGLGLGAGGQMTAAQRMMAKMGWKEG
QGLGKQEQGITAPLVAKKTDRRGGVIVDESSSKPPEKKPKSVNFDGPPTRVLLLRNMVGP
GEVDDELEDEVASECANYGTVTRVLIFEITQTGFPAEEAVRIFIQFERAEEATKAMIDLQ
GRFFGGRVVQASFFDEERFGRNELAPMPGEVPGFFD
NT seq 1191 nt   +upstreamnt  +downstreamnt
atgctgggcggcctgtacggcgacctcccgccgccgtcgtcggccggcgaagacgacaag
acctccacggcctccgtctggtccagcgccaccaagatggcgccgcccaccctccgcaag
ccgtcaaccaccttcgccccgcccccctcgctcctccgcaaccagcacctgctcccgccc
aaggccgcatccgcatccgcctccgcatccgcctccgcggctcccgccacggctcccccc
gtcgtggccgccgagcccgcccccgcgccgtccttccagccggcgttcgtggccgtccag
tccaccgtgctggaggagtacgacccggccaggcccaacgactacgaggactaccgcaag
gacaagctccggcgggccaaggaggccgagctgagcaaggagctcgagcgccgccgccgc
gaggagcaggagcgggagagggagcgcgagcagcgggagagggaggcccgcgagcgcgag
gagagggacttccagtccagggcatcctccctcaacatatccggcgaggaggcctggaag
cggagggcggcgatgagcggtggcgccggagctgctgcggcacagaggaccccctcgtcc
ccgccgcacggggatgggtttgccatcgggagctcatcttccgctgggttgggcctgggc
gccggcggacagatgactgctgcccagcggatgatggccaagatggggtggaaggaaggt
caagggcttggcaagcaagagcaggggatcactgctcctctagtagccaagaagaccgat
aggaggggaggggttattgttgatgagagcagttcaaagccaccagaaaagaagccgaaa
tcggtcaactttgatgggccgccaacacgagttttgctgctccgcaacatggttggtcct
ggtgaggtagacgacgagttggaagatgaggtggcatctgagtgtgccaattatgggaca
gtaactcgtgtactgatatttgagatcacacagacaggcttcccagctgaggaggctgtg
aggatattcatacagtttgagcgagcagaagaagcaacaaaggcgatgattgatctgcaa
gggcgattctttggcgggcgtgtggtgcaggcatccttctttgacgaggaaaggtttggg
aggaacgaacttgctcctatgccaggggaagtaccagggtttttcgactaa

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