Panicum virgatum (switchgrass): 120702684
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Entry
120702684 CDS
T07260
Name
(RefSeq) cathepsin B-like protease 2 isoform X1
KO
K01363
cathepsin B [EC:
3.4.22.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120702684
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120702684
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120702684
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120702684
00536 Glycosaminoglycan binding proteins [BR:
pvir00536
]
120702684
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.1 cathepsin B
120702684
Peptidases and inhibitors [BR:
pvir01002
]
Cysteine peptidases
Family C1: papain family
120702684
Chaperones and folding catalysts [BR:
pvir03110
]
Intramolecular chaperones
Papain family
120702684
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of microglial cells
120702684
Glycosaminoglycan binding proteins [BR:
pvir00536
]
Heparan sulfate / Heparin
Others
120702684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C1
Propeptide_C1
Motif
Other DBs
NCBI-GeneID:
120702684
NCBI-ProteinID:
XP_039842511
LinkDB
All DBs
Position
4K:complement(4767217..4770424)
Genome browser
AA seq
383 aa
AA seq
DB search
MGTTQRQLLLLFFLSAVAPQVVRALKPIPNSNLGVEEGDNSIGIIQKDIIETVNKHPDAG
WTAAHNPYFANYTVSEIAFIILSFPHLLTLKPSLFLQIAQFKRILGVKPTPQGVLTDVPA
KTYSRSLKLPKEFDARSKWSHCSTIGNILDQGHCGSCWAFGAVECLQDRFCIHMNMNISL
SVNDLVACCGFMCGDGCDGGYPIMAWRYFVQNGVVTEECDPYFDQVGCKHPGCEPAYPTP
MCEKKCKVQNQVWEEKKHFSVNAYRINSDPDDIMSEIYENGPVEVAFTVYEDFAHYKSGV
YKHITGGMMGGHAVKLIGWGTSDAGEDYWLLANQWNRGWGDDGYFKIIRGRNECGIEEDV
VAGMPSTKNMVRNYGGSFGTAVV
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccacgcagcggcagctgctcctgctcttcttcctatctgcggtcgccccgcag
gtagttagagcactgaaaccaatcccaaattccaatcttggggtcgaggagggagacaat
tccataggaatcatacagaaggacatcatagagacggtcaacaagcatcccgatgctggg
tggacggctgcacacaatccttactttgccaactatactgtaagtgaaatagcattcata
attttatctttcccccacctgttaaccttgaaaccatccctgtttctgcagattgcacaa
tttaaacgtatccttggagtgaagcccacaccacagggtgtgctgaccgatgttcctgcc
aaaacttattcaagatcactgaaacttccaaaggagttcgacgccagatctaagtggtct
cattgcagcacaattgggaacatacttgatcaaggtcattgtggctcctgttgggcattt
ggtgccgtggagtgcctccaggatcgtttttgcattcatatgaacatgaacatttcacta
tcagtcaatgacctagtggcatgctgcggttttatgtgcggtgatggttgtgatggaggc
tatcctatcatggcatggcgctactttgttcaaaatggtgttgtcacagaggagtgcgat
ccatatttcgatcaggttggttgcaagcatcctggatgcgaacctgcttatcctacacca
atgtgtgaaaagaaatgcaaggtgcagaaccaagtttgggaggaaaaaaagcatttcagt
gtcaatgcgtacagaataaattctgatccagatgacataatgtcagagatctatgaaaat
ggccctgtagaagttgctttcacagtttatgaggattttgcccactacaaatctggagta
tacaaacacattaccggtggcatgatgggtggccatgctgttaagttgattggatgggga
accagtgatgctggagaggattactggcttcttgcaaatcagtggaacagaggctggggt
gatgacgggtacttcaaaatcatacgaggcagaaacgaatgtggcatcgaagaggacgtt
gttgctggaatgccatccacaaagaatatggtcagaaactacggtggttcctttggaaca
gctgtagtttga
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