Panicum virgatum (switchgrass): 120702695
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Entry
120702695 CDS
T07260
Name
(RefSeq) starch synthase 1, chloroplastic/amyloplastic-like isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120702695
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120702695
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
120702695
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Storage polysaccharide
120702695
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
Glycos_transf_1
Glyco_trans_1_4
GT4-conflict
Motif
Other DBs
NCBI-GeneID:
120702695
NCBI-ProteinID:
XP_039842531
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All DBs
Position
4K:complement(4928675..4935847)
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AA seq
658 aa
AA seq
DB search
MATPAVGAACLLLARAAGAPGPRRGGGGGDQARPRRPQRAVRRRCVAELSREGPAPRPMP
QLAPPLVPGSLAPPRDEPEPAREPASTPPPVPDGGLGDLDLGLELEEIAENSINNTVVVE
SEQDSKIMVGKEQESEIMVGKEQARAKVTHSIVFVTGEASPYAKSGGLGDVCGSLPVALA
ARGHRVMVVMPRYLNGTSDKNYANAFYTKKHIRIPCFGGDHEVTFFHEYRDSVDWVFVDH
PSYHRPGNLYGDKFGAYGDNQFRYTLLCYAACEAPLVLELGGYIYGQNCMFVVNDWHASL
VPVLLAAKYRPFGVYKDSRSILVIHNLAHQGVEPASTYPDLGLPPEWYGALEWVFPEWAR
RHALDKGEAVNFLKGAVVTADRIVTVSKGYSWEVTTAEGGQGLDELLSSRKSVLNGIVNG
IDINDWNPATDEHIPYHYSADDLSGKAKCKAALQKELGLPIRPDVPLIGFIGRLDYQKGI
DLIKLIMPNLMREDIQFVMLGSGDQELEDWMRSTESNFRDKFRGWVGFSVPVSHRITAGC
DILLMPSRFEPCGLNQLYAMQYGTVPVVHATGGLRDTVENFNPFGDNGEQGTGWAFAPLT
TENMLWTLRTAISTYREHKSSWEGLMKRGMSKDFTWDHAAEQYEQIFQWAFIDQPYVR
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccggccgtgggcgccgcgtgcctcctcctcgcgcgggccgccggggccccg
gggcccaggcggggcggcggcggcggcgaccaggcgcgcccgcggcggccccagcgggcg
gtgcgccgccgctgcgtcgcggagctcagcagggagggccccgcgccgcgcccgatgccg
cagctggcgccaccgctcgtgcccggctccctcgcgccgccgcgcgacgagcccgagccc
gcgcgggagccggcgtcgacgccgccgcccgtgcccgacggcggcctgggggacctcgat
ctcggcctcgaactggaagagattgctgaaaattccatcaacaacacagtagttgtggaa
agtgagcaagactctaagatcatggttggaaaggagcaagaatctgagatcatggttggg
aaggagcaagctcgagctaaagtaacacatagcattgtctttgtaactggtgaagcttct
ccttatgcaaagtcagggggtctaggagatgtttgtggttcactacctgttgctcttgct
gctcgtggtcaccgtgtgatggttgtaatgccaagatatttaaatggtacctctgacaaa
aattacgcgaatgcattttacaccaagaagcacattcggattccatgctttggtggtgat
catgaagtaacctttttccatgagtatagagattctgttgattgggtgtttgttgaccat
ccctcgtatcacagacctggaaatctgtatggagataagtttggtgcttatggtgataat
cagttcagatacacactcctttgctatgctgcatgtgaggctcctttggtccttgaattg
ggagggtatatttacggacagaattgcatgtttgttgtgaacgattggcatgccagcctt
gtgccagtccttcttgctgcaaaatatagaccatttggtgtttataaagactcccgcagc
attctagtaatacataatttagcacatcagggtgtggagcctgcaagcacatatcctgac
ctggggttgccacctgaatggtatggagctctggagtgggtattccctgaatgggcaagg
aggcatgcccttgacaagggtgaggcggttaattttttgaaaggtgcagttgtgacagca
gatcgaattgtgactgtcagtaagggttattcatgggaggtcacaactgctgaaggtgga
caaggccttgatgagctgttaagttccaggaagagtgtgttaaacggaattgtaaatgga
attgacattaatgattggaaccctgccacggatgaacatatcccttatcattattctgct
gatgatctatctggaaaggccaaatgtaaagctgcattgcagaaggagctgggtttacct
ataaggcctgatgttcctctgattggcttcattggaagattggattatcagaaaggaatt
gatctcattaaacttatcatgccaaacctcatgcgggaagacattcaatttgtcatgctt
ggatctggtgaccaagagcttgaagactggatgagatctacagagtcgaacttcagggat
aaatttcgtggatgggttggatttagtgttccggtttcccaccgaataactgcaggctgc
gatatattgttaatgccgtccaggttcgaaccttgtggtctgaatcagctatatgctatg
cagtatggtacagttcctgttgtccatgcaactggggggcttagagacacagtggaaaac
ttcaacccttttggtgataatggagagcagggtacagggtgggcgttcgcacccctaaca
acggaaaacatgctgtggacattgcgaactgcgatttctacatatagagaacacaaatct
tcctgggagggactcatgaagcggggcatgtcaaaagacttcacatgggaccatgctgcg
gagcaatatgaacaaatcttccagtgggcctttatcgatcaaccttatgtccgataa
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