Panicum virgatum (switchgrass): 120702765
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Entry
120702765 CDS
T07260
Name
(RefSeq) probable galactinol--sucrose galactosyltransferase 6
KO
K06617
raffinose synthase [EC:
2.4.1.82
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00052
Galactose metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
120702765
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.82 galactinol---sucrose galactosyltransferase
120702765
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Gene cluster
GFIT
Motif
Pfam:
Raffinose_syn
Motif
Other DBs
NCBI-GeneID:
120702765
NCBI-ProteinID:
XP_039842621
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Position
4K:5869689..5877717
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AA seq
767 aa
AA seq
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MTITSSVKLAGGTLSVCGRTVLSGVPAAVAASSAAAAGAVDGVFIGADLAEPASRHVISL
GTLRGVRFMACFRSKLWWMSQRMGDKGGDVPHETQFLLVESTGAGGEDAAAAAYVVFLPL
VEGAFRASLQGGAGEALELCVESGDDDTRAASIERALFVGAAESDPFAAVAGAVAAARSA
LKTFRVRAEKKLPGIVDYFGWCTWDAFYQDVTQEGVEAGLRSLVAGGAPPKFVIIDDGWQ
SVGTDQPSPSPDEHAGEATQPRLPRLTGIRENSKFQNADDPAAGIKAVVRAAKEEYGLKY
VFVWHAITGYWGGVRPGAAGMERYRSSMQFPKISPGVAENDPGMRTDWITAQGVGLVPPR
AVYRFYDEQHAYLAAAGVDGVKVDEQCILETLGAGHGGRAQLTRQYHQALDASVAKNFPE
NGIIACMSHNTDALYCSKQTAVVRASDDFFPRDPVSHTIHIAAVAYNSVFLGEFMLPDWD
MFHSLHLAGEYHGSARAISGGPVYVSDAPGKHDFELLKKIVLPDGSVLRARLPGRPTKDC
LFTDPARDGVSLLKIWNMNKFTGVLGVYNCQGAVWSFVEKKTTFHRTGAGALTCGVKGSD
VHLISDAATDPDQWSGDCAVYRHGSGDLAVLPDGAALPVSLKVLEQDILTVSPIKDLAPG
FRFAPVGLVDMFNGGAAVEGLTYHLLDGGKLVGDGGSAACRSEEAVGLVCMEVRGRGRFG
SYSSVRPRRCMLGSAEIEFSYDPSSGLLTLLLEEMPGERVHKIVVEL
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcacatcatccgtcaagctcgccggcggcactctgtcggtctgcgggaggacg
gtgctgtccggcgtgccagccgccgtggcggcgtcctctgcggcagcggccggagcggtc
gacggggtcttcattggcgccgacctcgccgagccggcgtcccgccacgtcatttccctc
ggcaccttaaggggcgtgcgtttcatggcgtgcttccggagcaagctgtggtggatgtcg
cagcggatgggggacaagggcggcgatgtcccgcacgagacgcagttcctgctcgtggag
tccacgggcgccggtggcgaggacgcggcggcggcggcgtacgtcgtgttcctcccgctc
gtggagggcgcgttccgggccagcctccagggcggcgccggcgaggcgctggagctctgc
gtcgagagcggggacgacgacacgcgcgcggcgtccatcgagcgcgcgctcttcgtgggc
gctgcggagtcggaccccttcgcggccgtcgccggcgccgtcgccgccgccaggtccgcg
ctcaagacgttccgggtccgcgccgagaagaagctcccgggcatcgtggactactttggg
tggtgcacctgggacgccttctaccaggacgtcacgcaggagggcgtcgaggccgggctc
cgcagcctcgtcgccggcggcgcgccgcccaagttcgtcatcatcgacgacggctggcag
tccgtcggcacggaccagcccagccccagccccgacgaacacgccggagaggccacgcag
ccgcgcctgccccggctcaccggtatcagggagaacagcaagttccagaacgccgacgac
ccggccgccggcatcaaggcggtggtgcgcgcagcgaaggaggagtacgggctcaagtac
gtcttcgtctggcacgccatcaccggctactggggcggcgtccgtccgggcgccgccggg
atggagcgctaccgctccagcatgcagttccccaagatctcgccgggcgtcgccgagaac
gaccccggcatgaggaccgactggatcaccgcccagggggtcggcctggtgcccccccgc
gccgtgtaccggttctacgacgagcagcacgcgtacctcgccgccgccggcgttgacggc
gtcaaggtggacgagcagtgcatcctggagacgctcggcgccggccacggcggccgcgcg
cagctcaccaggcagtaccaccaggcgctcgacgcgtccgtcgccaagaacttccccgag
aacggcatcatcgcgtgcatgagccacaacaccgacgccctatactgctcgaagcagacg
gcggtggtgagggcgtctgatgatttcttcccgagggaccccgtctcgcacacgatccac
atcgccgcggtggcgtacaacagcgtgttcctcggcgagttcatgctcccggactgggac
atgttccactccctccacctggccggcgagtaccacggctcggcccgggcgatcagcggc
ggccccgtctatgtcagtgatgcccccgggaagcacgacttcgagctgctgaagaagatc
gtcttgccggacggctcggtgctccgcgcgcgcctgcctggccggccgaccaaggactgc
ctgttcaccgacccggcacgcgacggcgtcagcttgctcaagatatggaacatgaacaag
ttcaccggcgtgctgggcgtgtacaactgccagggcgcggtgtggagcttcgtggagaag
aagaccacgttccaccgcaccggcgccggcgccctgacctgcggcgtcaaaggcagcgac
gtccacctcatctccgacgccgcgacggacccggatcagtggagcggcgactgcgccgtg
taccgccacggcagcggtgacctcgccgtcctccccgacggcgcggcgctgcccgtctcc
ctcaaggtcctcgagcaagacatcctcaccgtgtcgccgatcaaggacctggcacccggg
ttcaggttcgccccggtcgggctggtcgacatgttcaacggcggcgcggcggtggaaggc
ctgacctaccacctcctcgacgggggcaagcttgtcggcgacggcggctctgctgcttgc
aggtcagaggaggccgtcggattggtgtgcatggaagtgcgggggcgtggcaggttcggc
tcctactcttctgtcaggccgaggaggtgcatgctgggctcggctgagatcgagttctcc
tacgacccttcgtccgggctgctgactctgctgctggaggagatgcccggggagagggtt
cacaagattgtcgtcgagttgtag
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