Panicum virgatum (switchgrass): 120702768
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Entry
120702768 CDS
T07260
Name
(RefSeq) 26S proteasome regulatory subunit 6A homolog
KO
K03065
26S proteasome regulatory subunit T5
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
120702768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pvir03051
]
120702768
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
120702768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
nSTAND3
AAA_5
AAA_16
RuvB_N
AAA_2
AAA_22
DUF815
AAA_14
AAA_7
PhoH
Mg_chelatase
AAA_24
AAA_lid_PRS2_C
AAA_19
TIP49
ATPase
AAA_33
IstB_IS21
AAA_11
RNA_helicase
AAA_28
Sigma54_activat
AAA_25
Parvo_NS1
LMBR1
Fez1
Motif
Other DBs
NCBI-GeneID:
120702768
NCBI-ProteinID:
XP_039842624
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Position
4K:5918831..5923336
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AA seq
430 aa
AA seq
DB search
MSSSGTPAPAAAMAVDDAEDDQLASMSTEDIVRASRLLDNEIRVLKDELQRTNLELESVK
EKIKENKEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTR
QTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIG
GLEKQIQELVEAIVLPMTHKDRFQRLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFL
KLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRT
MLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARARILQIH
SRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIVQVQA
KKKSSLNYYA
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcatccggcacccccgccccggcggcagcgatggccgtggacgacgcggaggac
gaccagctcgcctccatgtccacggaggacatagtccgggcctctcgcctcctcgacaac
gagatccgcgtcctcaaggacgagctgcagaggacgaacctggagctggagtcggtcaag
gagaagattaaggagaacaaggagaagattaagctcaacaagcagctgccgtaccttgtc
ggcaacatcgttgagatcttggaaatgaaccctgaggatgaagctgaggaggatggtgct
aacattgatttagactcgcaaaggaaaggaaaatgtgttgttttgaagacctccacgaga
caaactattttccttcctgttgttgggttagttgaccctgacaagcttaagcctggtgat
ctggttggagtaaacaaagatagctaccttatactggataccctgccatcagagtatgat
tcacgagtgaaggcaatggaggtagatgaaaagcccaccgaggattacaatgatattgga
ggtcttgaaaagcagattcaagagcttgtggaggcaattgtgctgcccatgacacataaa
gaccggttccagaggttgggtattcgtcctccaaaaggagttcttttgtatggaccacca
ggaacagggaagacactcatggctcgtgcatgtgctgcacagactaatgcaacttttctt
aagttagctggtccacaactcgttcagatgtttatcggtgatggagccaagcttgtccgg
gatgcatttcagcttgccaaagagaaagctccctgtattatatttattgatgagatagat
gccattggtacgaagcggtttgatagtgaagttagcggtgacagagaagttcagcggact
atgttggaattgctgaatcaactagatgggttcagcagcgatgagagaataaaggtcata
gctgcaacaaatcgtgctgacatccttgaccctgctctgatgcgatctggtcgtttggac
cgaaagatcgagttccctcacccatctgaagaagcaagagctagaatcttgcaaattcat
tcgagaaagatgaatgtaaatcccgacgtcaactttgaagagttggctcgctcaacagat
gacttcaatggtgcacagctaaaggcagtttgtgtggaagctggtatgcttgccctaagg
cgggatgctacagaggtgactcacgaggacttcaatgaaggaattgtacaagtccaggcc
aagaagaagtcgagcttgaactactatgcttaa
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