Panicum virgatum (switchgrass): 120702845
Help
Entry
120702845 CDS
T07260
Name
(RefSeq) hydroxycinnamoyltransferase 4-like
KO
K13065
shikimate O-hydroxycinnamoyltransferase [EC:
2.3.1.133
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00940
Phenylpropanoid biosynthesis
pvir00941
Flavonoid biosynthesis
pvir00945
Stilbenoid, diarylheptanoid and gingerol biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
120702845
00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
120702845
00941 Flavonoid biosynthesis
120702845
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.133 shikimate O-hydroxycinnamoyltransferase
120702845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transferase
PapA_C
TRI-like_N
Motif
Other DBs
NCBI-GeneID:
120702845
NCBI-ProteinID:
XP_039842737
LinkDB
All DBs
Position
4K:complement(6753217..6754830)
Genome browser
AA seq
432 aa
AA seq
DB search
MATVEVLTSEVVVPAEETPSGGLWLSNLDLAARRGYTPTVYFFRSNGEPGFFAADTVKGS
LARALVAFYPLAGRLGVDGAGRVQVDCTGEGAVFVTARSGYALDDLMREFVPCRAMRDLL
VPATPTPDPPCALLFVQVTYLRCGGVVLGQAMHHSVCDARGAAHFFETWASIARGDAAAD
APVPPCFDHGLLAARPGPARAVLYDHPEYKPDPEPPVDAAGGSDYSSAILTMTRAQVGAF
KARCPGASTFRAVAALVWRCACRARALPPEAETRLYSMIDMRARLDPPLPAGYFGNAVVR
TSVSATAGEVLSNPVGHAARRALAVTSQGGDYARSLVDYLEGVDAMDLPRSGISRAHLRA
ISWMGMSLHDSDFGWGAPAFMGPALMYYSGFVYVLNAAGKGGGLALVLSLEPETMPEFRK
VFAEELARLEVV
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggtggaggtgttgacgtcggaagtggtcgtgccagccgaggagacgccgtcg
ggcggcctctggctgtccaacctggacctcgccgcgcgccgcgggtacacgcccacggtg
tacttcttccggtccaacggtgagccggggttcttcgccgcggacaccgtcaagggcagc
ctcgccagggcgctggtcgcgttctacccgctcgccggacgtctcggcgtcgacggcgcc
gggcgcgtccaggtcgactgcaccggcgagggcgcggtgttcgtgaccgcgcggtcgggg
tacgcgctggacgacctgatgcgcgagttcgtgccgtgccgcgcgatgcgggacctgctc
gtgcccgcgacgcccacgccggacccgccgtgcgcgctgctgttcgtgcaggtcacgtac
ctgcgctgcggcggcgtcgtgctggggcaggcgatgcaccactcggtgtgcgacgcgcgg
ggcgccgcgcatttcttcgagacgtgggcgagcatcgcgcgcggggacgccgccgcggac
gcgcccgtgccgccgtgcttcgaccacggcctgctcgcggcgcgccccggccccgcgcgc
gcggtgctgtacgaccacccggagtacaagcccgacccggagccgccggtggacgccgcc
ggcgggtccgactactcgagcgccatcctcaccatgaccagggcgcaggtgggcgcgttc
aaggcgcggtgcccgggcgcgtccacgttccgcgccgtggcggccctggtgtggcggtgc
gcgtgccgggcgcgggcgctgcccccggaggcggagacgcggctctactccatgatcgac
atgcgcgcgcgcctggacccgccgctgccggcgggctacttcggcaacgcggtggtgcgc
acgtcggtctccgccacggccggggaggtgctgtccaacccggtcggccacgccgcgcgg
cgcgcgctcgcggtgacgagccagggcggcgactacgcgcggtcgctggtggactacctg
gagggcgtggacgccatggacctgccccggagcggcatctcgcgggcgcacctgcgcgcc
atcagctggatgggcatgtcgctgcacgactccgacttcggctggggcgcgccggcgttc
atggggccggcgctcatgtactacagcggcttcgtgtacgtgctgaacgcggcgggcaag
ggcggcggcctcgcgctcgtgctgtcgctggagcccgagaccatgccggagttcaggaag
gtcttcgccgaggagctcgcgcgcctggaggttgtgtag
DBGET
integrated database retrieval system
