Panicum virgatum (switchgrass): 120702851
Help
Entry
120702851 CDS
T07260
Name
(RefSeq) AUGMIN subunit 3-like
KO
K16586
HAUS augmin-like complex subunit 3
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120702851
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centrosome formation proteins
Augmin complex
120702851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAUS-augmin3
SKA2
NTR
Motif
Other DBs
NCBI-GeneID:
120702851
NCBI-ProteinID:
XP_039842745
LinkDB
All DBs
Position
4K:6848283..6857973
Genome browser
AA seq
617 aa
AA seq
DB search
MSGAALCAALTELGFDGEDPLDADALEWPFQYEEARPLLAWICSCLRPSNVLSPSHLAQY
EQLVEEGRLLEGEDLDSAFDSISAFSSKKDNQEAVFGSEETILDIREAKLAHRAEVFELQ
KQLTRQQAQFDLLAGQASTLIQGRRARLSAMSTVSGHLLSLDEILSSRNLEMNAVLGRIA
TTTQELAHYHSGDEESIYLAYSDFHPYVVGDLACTKELNRWFSKQFEKGPFRLVAEEGKS
KCSWVSLDDITNCLMRGDSEKSHHHQRVAELQRLRSIFATSERQWIEGQVENAKQQAILS
ILKSQVSSDEAHIHRDIHSLRRKGSELAGELSTLSQKVQAFLSETIPCLCSELAQLQGTY
ILQGDYDLKVMRQEYYINRQKTFINHLVNQLARHQFLKIACQLERKNIASAYSLLRVIES
ELQSYLSAVNTRLGHYNSLIQAASEVREQGAIDDRDTFLHAARDLLCIHSNVQATVPTYM
SAHALVQQISALQSDLLSLQSELENTLPADRKRCINELCTLIQTVEQLLFASSTTAEPIL
TPWPLMRALDDMENANAQVEVSVEEVTKARTQKIKIFENRAHEVGRERQIFIDFFCNPER
LKNQVRELTSRVKALQD
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgagcggggctgcgctgtgcgcggcgctgacggagctggggttcgacggggaggacccg
ctggacgcggacgcgctggagtggccgttccagtacgaggaggcgcgcccgctgctcgcc
tggatctgctcctgcctccgcccctccaacgtcctctccccatcccacctcgcacagtat
gagcaactcgtggaagagggaagattgctagagggtgaagatttggactctgcctttgat
agtatttcagccttttcaagcaagaaagacaaccaggaggctgtttttggatccgaagaa
accattcttgatatccgcgaagcaaaactagcacatagggctgaagtttttgagttacag
aagcagcttacacggcagcaagcacagtttgatttgcttgcaggccaagcttctactctt
attcaaggtagaagggcacgtttatctgctatgtctacagttagtggacatctactatca
ttagatgagatactttcttccagaaacttggagatgaatgcagttcttggaagaatcgcc
actactactcaggaactggcccattatcattcaggggatgaggaaagtatatacttggca
tattcagatttccacccttatgttgttggcgacttggcttgcacaaaagagctaaatcgg
tggttttcaaagcaattcgagaagggtccatttcgacttgttgctgaggaggggaaatcg
aaatgttcctgggttagtcttgatgacatcactaattgcttgatgagaggagattctgaa
aagtctcatcatcatcaacgtgtggctgagttgcagcgacttcgttccatatttgctaca
agtgaaagacagtggattgaaggacaagttgagaatgctaaacaacaggcaatactttca
atattaaaatcacaagtctcatcagatgaggctcatatacatagggacatccattctctt
aggagaaaaggttctgagcttgctggagaactctcgacactttcacaaaaggtgcaggct
tttctatctgagacgataccatgcctctgttcagaacttgctcaacttcaaggcacatat
attttgcaaggggattatgatttaaaggtcatgcgccaggaatactatattaacaggcaa
aagacgttcatcaatcacttggttaatcagctcgccagacaccagtttctgaagattgct
tgccaacttgaaaggaagaacatagctagtgcttactcattgcttagagtaatagagtct
gagttacagagctacctgtcagcagtcaatacccgtttgggccattataattcattaatt
caagctgcatctgaagtaagggaacaaggagcgattgacgatcgtgacactttcctccat
gcagcgcgagatcttctatgtattcactcaaatgtccaagcaacagtgccaacatacatg
tcggcacatgcattagttcagcagatatcagcacttcaatctgacttgctttctcttcag
tctgagctggagaatacccttccagctgacaggaaaagatgtataaatgagctatgcact
ctgattcaaacagttgaacagcttctgtttgcatcgtcaacaactgcagaaccaatattg
acaccttggccactgatgcgggcacttgatgatatggaaaacgccaacgctcaagttgaa
gtttctgtggaagaagtaaccaaggctcgcacccaaaagataaagatcttcgaaaatcgt
gcccatgaggtggggagggagaggcaaatattcattgattttttctgcaaccccgagcgc
ctcaagaatcaagtcagagagctaacctcccgcgtgaaagctctccaggactag
DBGET
integrated database retrieval system