Panicum virgatum (switchgrass): 120702992
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Entry
120702992 CDS
T07260
Name
(RefSeq) dynamin-2A-like
KO
K01528
dynamin 1/3 [EC:
3.6.5.5
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04144
Endocytosis
pvir05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120702992
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120702992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120702992
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120702992
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
120702992
Membrane trafficking [BR:
pvir04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
120702992
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
120702992
RhoA-dependent endocytosis
120702992
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120702992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_N
Dynamin_M
GED
PH
PH_8
MMR_HSR1
PH_11
PH_20
AIG1
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
120702992
NCBI-ProteinID:
XP_039842926
LinkDB
All DBs
Position
4K:complement(9769490..9777625)
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AA seq
913 aa
AA seq
DB search
MEAIEELSELSESMRQAASLLADDDPSDDAAPRRPTTFLNAVALGNVGAGKSAVLNSLIG
HPVLPTGENGATRAPIVLDLQREPGLSSKSIVLQIDSKSQQVSASALRHSLQDRLSKGAS
GGSGRGRADEIYLKLRTSTAPPLKLIDLPGIDQRAVDDSMINEYAGHNDAILLVVIPAMQ
AADVASSRALRLAKDIDSDGTRTVGVISKVDQANGDAKTIACVQALLSNKGPKNLPDIEW
VALIGQSVAIASAQSVGSENSLETAWRAEAESLKNILTSAPQNKLGRLALVDTIAKQIRK
RMKVRLPNLLSGLQGKSQMVQDELARLGESMVQSPEGTRAVALELCREFEDKFLAHITSG
EGSGWKIVASFEGKFPDRIKQLPLDRHFDLNNVKRIVLEADGYQPYLISPEKGLRSLIKI
VLEMAKEPSRLCVEEVHHVLLDIVNASANATPGLGRYPPFKREVVAIASNALESFKNDSK
KMVVALVDMERAFVPPQHFIRLVQRRMERQRREDELKNRSSKKTQEAEQSTSKRASSPQT
DSEQGGGSLKSMKDKSGQQDKDAKEVSNLQVAGPAGEITAGYLLKKSAKTNGWSKRWFVL
NEKSGKLGYTKKQEERHFRGVITLEECNLEEVEEEEPSKSSKDSKKANGPEKTPSLVFKI
TNRVAYKTVLKAHSAVVLKAESMADKVVWVNKIKAVIQSKGGSFKGPNTEGGSMRQSHSD
GSLDTMARRPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLY
SSISGQSNAKIEELLQEDHNAKRRREKYQKQSSLLSKLTRQLSIHDNRASVSSYSNDTSE
AESPRTPSRSGEDWRSAFDSASNGPAAASSNSESRSRSADGRSRRYENGDVSAGANSGSR
RTPNRLPPAPPRY
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatagaggagctgtccgagctctccgagtcgatgcgccaggcggcgtcgctc
ctcgccgacgacgacccctccgacgacgccgcgccgcgccgccccaccacgttcctcaac
gccgtcgcccttggcaacgtcggagcaggcaagtcggccgtgctgaacagcctcatcggc
cacccggtcctgccgacaggggagaacggggcaacgcgggcgccgatagtgctggacctg
cagagggagccgggtctcagcagcaagtccatcgtgctccagatcgacagcaagtcgcag
caggtgtccgcaagtgccctccggcattcactgcaggacagactcagcaagggggcatct
ggtggatcagggaggggccgcgctgatgagatttacctcaagctgcggacaagtacagct
cccccattaaagctgattgatttacctgggatagaccagcgagctgttgatgattccatg
atcaatgagtacgctgggcacaatgatgcaatactgcttgttgtgatacctgcaatgcaa
gctgctgatgtcgcatcatctcgagctctaaggctggccaaggatattgattcagatggg
acgagaactgtgggtgttataagcaaagttgatcaagcaaatggagatgcaaaaactata
gcatgtgttcaggccctactgtcaaacaaaggcccaaaaaaccttccagacattgaatgg
gttgctctaataggacaatcggttgcaattgcgtcagcgcaatcagttgggtctgaaaac
tcgctagaaacagcttggcgagctgaagctgaaagcctgaaaaacatcttaactagtgct
cctcagaataagctgggcagacttgctttggttgacaccattgctaagcagatacgtaaa
agaatgaaagtgcggcttcctaaccttttgagtggccttcagggtaaatctcagatggtg
caagatgaactagcaagactcggagagtctatggtacaaagtcccgaaggaaccagggca
gttgctttggagctgtgccgggaatttgaagataaatttcttgctcatataacatctggt
gagggatctggttggaaaattgttgcaagttttgaaggcaagtttccagatagaattaaa
cagctaccattggacaggcattttgatctcaacaatgtcaaaaggattgtcttggaagcc
gatggttatcaaccatatttgatatctccagagaaaggactgagatccttaataaaaata
gtactggaaatggcaaaggagccatcacgactatgtgttgaagaggttcatcatgtattg
ttagatatagtcaatgcttccgcaaatgccacaccaggacttggaagatatcctccattc
aagcgcgaggttgttgcaatagcatcgaatgcactcgagagcttcaaaaatgactccaag
aagatggttgtagcacttgttgatatggagcgtgcctttgttcctcctcaacattttatc
cgcttagtacaaagaagaatggaaaggcagcgtcgtgaggatgagttaaaaaatcgatct
tctaagaaaacacaagaggctgaacagtcaacgtcaaagagggcctccagtccacaaaca
gactctgagcaaggtggtggcagcttaaaatcaatgaaagacaaatctggtcagcaagat
aaagacgcaaaagaggtatcgaatttgcaggttgctggtcctgctggtgaaattactgca
ggttacctcttaaagaaaagcgcaaaaactaatggctggagcaaaaggtggtttgttctt
aatgagaagagtggaaagcttggatacacaaaaaaacaagaggagagacattttcgtggc
gtcatcactcttgaggagtgcaaccttgaggaggtagaggaggaagaaccttctaaaagt
tcaaaagattcaaaaaaggcaaatggaccagagaaaactccaagtcttgtgtttaagata
accaatagggttgcttacaaaacagtcctcaaagctcacagtgccgttgtgttaaaggct
gagagcatggctgacaaggttgtgtgggtaaataagatcaaagctgttattcagagcaaa
gggggttctttcaagggtcctaatactgagggtggttcaatgaggcaaagccattcggat
ggctccttagatactatggcacgaagacctgctgatccagaggaagaacttagatggatg
tctcaagaagttcgtggttatgttgaggctgttttgaatagtcttgcagcaaatgttcca
aaggccattgtgctttgccaagtggagaaagcaaaggaagatatgcttaaccagctgtac
agctcaataagtgggcaaagcaatgctaagattgaagagcttctccaagaagaccataat
gctaagcgcagaagggagaagtaccaaaaacaatcatctctcctgtcaaaacttactcgt
caactcagtatccatgacaacagggcatctgtttcctcttattctaacgacacctctgaa
gctgagagccctcgaacacccagccgctcaggtgaggactggaggtctgcctttgattct
gcatccaacgggcctgctgctgcaagctcaaacagtgagtcaaggtcgagaagcgctgat
ggtcgcagccggcgctacgagaatggggatgtgagcgcaggtgccaactctggcagccga
cgcacgccaaaccggttgccaccagcaccaccaagatactaa
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