Panicum virgatum (switchgrass): 120703074
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Entry
120703074 CDS
T07260
Name
(RefSeq) soluble starch synthase 2-3, chloroplastic/amyloplastic-like
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120703074
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120703074
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
120703074
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Storage polysaccharide
120703074
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_trans_1_4
Glycos_transf_1
GT4-conflict
Glyco_transf_4
Motif
Other DBs
NCBI-GeneID:
120703074
NCBI-ProteinID:
XP_039843014
LinkDB
All DBs
Position
4K:complement(10886320..10890484)
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AA seq
767 aa
AA seq
DB search
MSSSAASSALILALSSGTPGGRRRCAPPSRTGASLITFPLWAPRERDDATVARAEAGPGG
WDAAPPPERRAGAGAADASSRQPRARRKAVSRRREPPVQPVSRYGSGAAGNAAAGQNGAL
AGGETKSIVAAPPATIVKFPGPGYTVILPAAQDVAPRAAVPVPAPEPPPLPPSEENFVSP
PASIPMPGADGNAGLAEKRRAQVDVEGVPNPIPPPPPPPPAPAVQEQEAAWDFKKYIGFD
EPVETKDEAGVGADVAGSFEDHENDDPGPLAGENVMNVIVVSAECSPWCKTGGLGDVAGA
LPKALARRGHRVMVVVPRYGDYAEAFDMGITKYYKAAGQDLEVKYFHAFIDGVDFVFIDA
PLFRHRQGDIYGGNRQEIMKRMILFCKVAVEVPWHVPCGGVCYGDGNLVFIANDWHTALL
PVYLKAYYRDNGMMQYTRSVLVIHNIAHQGRGPVAEYPYMDLPEHYLQHFELYDPVGGEH
ANIFAAGLKMADQVVTVSRGYLWELKTVEGGWGLHDIIRSNDWKMNGIVNGIDHQEWSPE
VDAHLRSDGYTNYSLRTLDAGKRQCKAALQRELGLEVRDDVPLLGFIGRLDGQKGVDIIG
DAMPWLAGQDVQLVMLGAGRADLERMLQQLERAHHDRVRGWVGFSVPMAHRITAGADVLL
MPSRFEPCGLNQLYAMAYGTVPVVHAVGGLRDTVAPFDPFGDAGLGWTFDRAEPGKLVEA
LGHCLDTYRNYRESWRGIQARGMSQDLSWDHAAELYEEVLVKAKYQW
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtcggccgcctcgtccgccctcatcctcgcgctctcctccggcacccccggg
gggcgccggcgctgtgccccgccgtcccgcaccggcgcgagcctcatcaccttcccgctc
tgggcgccgcgggagcgggacgacgcgacggtggcgcgcgcggaggccgggccggggggc
tgggacgcggcgccgccgccggagcggagggccggcgccggcgccgccgacgccagcagc
aggcagccccgcgcgcggcgcaaggcggtctccagacggagggagcctcctgttcagccg
gtcagccgttacggctccggggcggcggggaacgcggcggccggccagaacggcgcgctg
gcgggcggcgagaccaagtccatcgtcgccgcgccgccggccaccatagtgaagttcccg
ggcccgggctacaccgtgatcctccccgccgcccaggacgtagcgccgagggctgccgtc
ccggtcccggccccggagccaccgccgctgccaccgtctgaggaaaacttcgtgtcgcca
ccagcttccattcccatgcccggcgccgacggcaatgccggacttgcggagaagaggcgc
gcacaggttgacgtggaaggagttccaaatccaattccaccacctcctcctcctccgcct
gcgcctgcggtgcaagaacaagaggctgcttgggatttcaagaagtatatcggtttcgac
gagcctgttgaaacgaaggatgaggccggggttggtgcggatgttgctggttcttttgaa
gatcacgagaacgatgatcctggccctttggctggggagaatgtcatgaacgtgatcgtg
gtgtctgctgaatgttctccctggtgcaaaacaggtggccttggagatgttgcgggagct
ctgccgaaggctttggccagaagaggacatcgtgttatggttgtggtaccaaggtatggg
gactatgcggaagccttcgacatgggaatcacgaaatactacaaagctgcaggacaggac
ttggaagtgaaatattttcatgcatttattgatggagtcgattttgtgttcattgatgca
cctctcttccggcaccgtcaaggtgacatttatggggggaatagacaggaaattatgaag
cgcatgattttgttctgcaaggttgctgttgaggttccttggcacgttccatgtggcggt
gtgtgctatggtgatggcaatttggtgttcattgctaatgattggcacactgcactcctg
cctgtttatctgaaagcatattacagagacaatggcatgatgcagtacactcgctccgtt
ctcgtcatacacaacatcgctcaccagggtcgcggccctgtagctgaatacccgtacatg
gacctgcctgaacactacctccagcacttcgagctgtacgaccccgtcggcggtgagcac
gccaacatcttcgcggcgggcctgaagatggcggaccaggtggtgaccgtgagccgcggc
tacctgtgggagctgaagacggtggaaggcgggtggggcctccacgacatcatccggtcc
aacgactggaagatgaacggcatcgtgaacggcatcgaccaccaggagtggagccccgag
gtggacgcgcacctccggtcggacgggtacaccaactacagcctccggacgctggacgcc
ggcaagcggcagtgcaaggcggcgctgcagcgggagctcgggctggaggtgcgcgacgac
gtgccgctgctggggttcatcgggcggctggacgggcagaagggcgtggacatcatcggc
gacgcgatgccgtggctggccgggcaggacgtgcagctggtgatgctgggcgccgggcgc
gcggacctggagcggatgctgcagcagctggagcgggcgcaccacgacagggtgcgcggg
tgggtggggttctcggtgcccatggcgcaccgcatcacggcgggcgccgacgtgctgctg
atgccgtcccggttcgagccgtgcgggctgaaccagctgtacgccatggcgtacggcacc
gtccccgtggtgcacgccgtgggcgggctgcgggacacggtggcgcccttcgacccgttc
ggcgacgccgggctcgggtggacgttcgaccgcgcggagcccggcaagctggtcgaggcg
ctcgggcactgcctcgacacgtaccggaactacagggagagctggaggggcatccaggcg
cgcggcatgtcgcaggacctcagctgggaccacgccgccgagctctacgaggaggtcctc
gtcaaggccaagtaccagtggtga
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