KEGG   Panicum virgatum (switchgrass): 120703077
Entry
120703077         CDS       T07260                                 
Name
(RefSeq) ATP-dependent zinc metalloprotease FTSH 6, chloroplastic
  KO
K03798  cell division protease FtsH [EC:3.4.24.-]
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pvir01002]
    120703077
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:pvir03110]
    120703077
Peptidases and inhibitors [BR:pvir01002]
 Metallo peptidases
  Family M41: FtsH endopeptidase family
   120703077
Chaperones and folding catalysts [BR:pvir03110]
 Other chaperones and cochaperones
  AAA proteases
   120703077
SSDB
Motif
Pfam: Peptidase_M41 AAA AAA_lid_3 TIP49 AAA_16 AAA_33 RuvB_N AAA_5 AAA_17 AAA_22 LonB_AAA-LID AAA_28 Mg_chelatase IstB_IS21 nSTAND3 AAA_14 ABC_tran Parvo_NS1 AAA_18 AAA_7 DUF5906 Sigma54_activat TsaE RNA_helicase AAA_24 Peptidase_M50B Zeta_toxin
Other DBs
NCBI-GeneID: 120703077
NCBI-ProteinID: XP_039843018
LinkDB
Position
4K:11004540..11006334
AA seq 494 aa
MNNPGAGPSLPFGLGRSRAKFQMEPNTGITFDDVAGVDEAKQDFQEIVQFLRSPEKFAAV
GARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFDRA
KASAPCLVFIDEIDAVGRRRGTGIGGGNDEREQTLNQLLTEMDGFGGESGVLVIGATNRP
EILDDALLRPGRFDRRVGVGLPDVRGREEILRFHSSNKRLDPDVSLGVVAMRTPGFSGAD
LANLMNEAAILAGRRGKDRITVKEIDDSIDRIVAGLEGTTMTDGKTKMLVAYHEIGHAVC
ATLTAGHDAVQKVTLIPRGQARGLTWFLPGEDPTLVSRQQILARIVGGLGGRAAEEVIFG
EPEVTTGAAGDLQQVTQVARQMVTTFGMSEIGPWALIEPAAQSGDVVLRMLARNSMSERL
AADIDAAVKRIVDRAYEVAKEHVRRNRAAIDHLVDVLLEKETLSGDEFRAILSEYVDIGK
EQRETAARTELVTA
NT seq 1485 nt   +upstreamnt  +downstreamnt
atgaacaaccccggcgccggccccagcctgccgttcgggctcggcaggtccagggccaag
tttcagatggagcccaacacggggatcacgttcgacgacgtcgccggcgtggacgaggcc
aagcaggacttccaggagatcgtccagttcctcaggtcgccggagaagttcgcggcggtg
ggggcgaggatccccaagggcgtgctgctggtgggcccgccggggacggggaagacgctg
ctggctaaggccatcgcgggggaggccggcgtgcccttcttctcgctgtcggggtccgag
ttcatcgagatgttcgtcggcgtgggcgcgtcgcgggtgcgggacctcttcgacagggcc
aaggccagcgcgccgtgcctcgtcttcatcgacgagatcgacgccgtcggccgccgccgc
ggaacgggcatcggcggcgggaacgacgagagggagcagacgctgaaccagctgcttacg
gagatggacgggttcggcggcgagagcggcgtcctcgtgatcggcgccaccaaccggccg
gagatcctcgacgacgcgctgctccgcccgggccgcttcgaccggagggtcggcgtcggg
ctccccgacgtgcgcggccgggaggagatcctccggtttcacagctccaacaagaggctg
gaccccgacgtgtcgctcggcgtggtggccatgcgcacccccgggttcagcggcgccgac
ctcgccaacctcatgaacgaggccgccatactcgccggccgccgcggcaaggaccgcatc
accgtcaaggagatcgacgactccatcgaccgcatcgtcgccggcctcgagggcaccacc
atgaccgacggcaagaccaagatgctcgtcgcctaccacgagatcggccacgccgtctgc
gcgacgctgacggcggggcacgacgcggtgcagaaggtgacgctgatcccgcgaggccag
gcgcgcgggctgacatggttcctgccgggggaggacccgacgctggtgtccaggcagcag
atcctggcgcgcatcgtgggcgggctcggcgggcgcgccgccgaggaggtgatcttcggc
gagcccgaggtgacgacgggggctgcgggcgacctgcagcaggtgacgcaggtggcgcgg
cagatggtgaccacgttcgggatgtcggagatcgggccgtgggcgctcatcgagccggcc
gcgcagagcggcgacgtcgtgctccggatgctggcccggaactccatgtccgagaggctc
gccgccgacatcgacgccgccgtgaagcgcatcgtcgaccgggcgtacgaggtcgccaag
gagcacgtcaggaggaaccgcgcggccatcgaccacctggtggacgtgctcttggagaag
gagacgctctccggcgacgagttccgggccatcttgtccgagtacgtggacatcggcaag
gagcagagggagacggcggccaggacagagctggtcaccgcttga

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