Panicum virgatum (switchgrass): 120703084
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Entry
120703084 CDS
T07260
Name
(RefSeq) probable galacturonosyltransferase 9
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120703084
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120703084
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
120703084
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120703084
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
DUF2470
NDUF_C2
Motif
Other DBs
NCBI-GeneID:
120703084
NCBI-ProteinID:
XP_039843026
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Position
4K:11102420..11105901
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AA seq
502 aa
AA seq
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MAGGRAFRPSAPRRAAFAALLTLLLLAALSFLLSSAPASSARSSAPPSARLAAVRRHAAD
HAAVLAAYAAHARKLKEASAAQSLSFSSLSSDLSALSARLASHLSSSSLPEDALRPLEKE
ARERIKFARSLAADAKEGFDTQSKIQKLSDTVFAVGEQLARARRGGRMSSRIAAGSTPKS
LHCLAMRLLEARLANPAAFADDPEPSPEFDDPALYHYAVFSDNVLAVSVVVASAARAAAD
PSRHVFHVVTAPMYLPAFRVWFSRRPPPLGVHVQLLAYSDLPFLNATNSPVIRQIEGGNR
DVALLDYLRFYLPDMFPALRRVVLLEDDVVVQKDLAALWQVDLDGKVNGAVEMCFGGFRR
YRKYLNFTQPIVRDRFNPGACAWAYGVNVFDLEAWRQAGCTELFHQYMEMNEDGELWDPT
SVLTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRSAAVIHFDGNMKPWLDVALNQY
KALWTKYVDTEMEFLTLCNFGL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggccggcggccgcgcgttccggccgtccgcgccgcgccgcgcggccttcgcggcgctg
ctcacgctcctactcctcgcggccctctccttcctcctctcctccgcgccggcctcctcg
gcccgctcctcggccccgccgtccgcgcgcctcgccgccgtccgccgccacgcggccgac
cacgcggcggtcctggccgcgtacgccgcgcacgcgcggaagctcaaggaggcgtccgcg
gcgcagtcgctctcgttctcgtccctctcctccgacctctccgcgctctccgcccgcctc
gcctcccacctctcctcctcctccctccccgaggacgcgctccggcccctcgagaaggag
gcccgcgagcgcatcaagttcgcgcgctccctcgccgccgacgccaaggagggattcgac
acccagtccaagatccagaagctctccgacaccgtcttcgccgtcggcgagcagctcgcg
cgcgcgcgccgcgggggccgtatgtcctcccgcattgccgcgggctccacccctaagtcg
ctccactgcctcgccatgcgcctcctcgaggcccgcctcgccaacccggccgcttttgcc
gacgaccccgagccgtcccccgagttcgacgaccccgcgctgtaccactacgccgtcttc
tccgacaatgtgctcgccgtctccgtcgtggtggcctctgcagcgcgcgctgcggccgac
ccctcgcgccacgtctttcacgtcgtcaccgcgcccatgtacctgcctgcattccgcgtc
tggttttcgcgccgcccgccgccgctcggcgtgcacgtccagctccttgcctactccgac
ttgccgttcctcaacgccaccaactcgccggtgatcaggcagatcgagggcggtaacagg
gatgtcgcgttgctggattacctgaggttctacctcccagatatgttccctgcgctgcgg
agggttgtgcttttggaggacgatgtggtggtgcagaaggatttggcagcgctttggcag
gttgacttggatgggaaggtgaatggtgcggtggagatgtgctttggcggattcaggagg
tatagaaagtatctcaacttcacccagcccattgtgcgggatcggttcaatcctggtgcc
tgtgcatgggcatatggggtaaatgtgtttgatcttgaggcatggcggcaggctggttgc
acagaactgttccatcagtacatggaaatgaatgaggatggcgagctgtgggatccaaca
tctgttctaacggctggattgatgtcattctatggcaataccaagccattggataagtca
tggcatgtaatgggtcttggctataatccaagcatcagccctgaggcaatccgaagtgct
gcggtgatacactttgatgggaacatgaagccctggcttgatgtcgctttgaaccaatac
aaggccctgtggacaaaatatgttgacactgaaatggaattcctaaccctatgcaacttt
ggtctatga
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