Panicum virgatum (switchgrass): 120703202
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Entry
120703202 CDS
T07260
Name
(RefSeq) ribonuclease TUDOR 1-like
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
pvir
Panicum virgatum (switchgrass)
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Gene cluster
GFIT
Motif
Pfam:
SNase
TUDOR
Agenet
Motif
Other DBs
NCBI-GeneID:
120703202
NCBI-ProteinID:
XP_039843146
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All DBs
Position
1K:complement(33296345..33303521)
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AA seq
986 aa
AA seq
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MATNTGASGWLRGKVKAVTSGDCLLIMGSTKAEIPPEKSITLSYLMAPRLARRGGVDEPF
AWESKEFLRKLCIGKEVTFRVDYTAPNIGREFGTVYLGDKNVAYSVVSAGWARVKEQGPK
GGEQNPYLTELLRLEEVAKQQGVGRWSKEPGAAEESIRDLPPSAIGEASGFDAKGFAVAN
KGKSLEAIVEQVRDGSTVRVYLLPSFQFVQIYVAGVQAPSMGRRSSAPTIVAETDGTANG
ANGEDSEGAPAQLTTAQRLAASAASAEIPPDRYGREAKHFTETRVLNRDVRIVVEGTDSF
SNIIGSVYYPDGETAKDLALELVENGLAKYVEWSANMLDVEVKIKLKNAELQAKKDQLRI
WTGFKPPVTNSKPIHDQKFTGKVVEVVSGDCIIVADDAAPYGSPSAERRVNLSSIRAPRM
GNARRDEKPDNFAREAKEFLRTRLISKQVAVEMEYSRRISTVDGQNAAPTANTADTRVLD
YGSVFLGSPSQADGDDVSSTPSSASQPGVNIAELLLSRGFAKTSKHRDYEERSHYYDALL
AAESRAEKAKKGVHSLKESPVMHITDLTTVSAKKAKDFLPFLQRNRRHSAVVEYVFSGHR
FKLTIPKETCSIAFSLSGVRCPGKGEPYSDEAIALMRRRILQRDVEIEVEAVDRTGTFIG
SLWESKTNMGSVLLEAGLAKLSSFGLDRISDAYVLTRAEQSAKQQKLKIWENYVEGEEAS
NGSTPASKQKEILKVVVTEVLGGGKFYVQTVGDQRVASIQQQLASLKLKDAPVIGAFNPV
KGEIVLAQFSLDNSWNRAMIVNGPRAVESPNDKFEVFYIDYGNQEVVPYSRLRPVDPSIS
SSPALAQLCSLAFIKVPSLEDDFGQEAAEYLSECLLSSSKQYRAMIEDRDTSGGKSKGQG
TGNVLIVTLVDAETESSINATMLEEGLARLERSKRWDTRERKTALQNLEQFQEKAKKERL
RMWQYGDVESDEDEQAPAARKPGGRR
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaacacaggagcgtcaggatggttgaggggtaaggttaaggctgtgacatca
ggggattgtctactcatcatgggaagcacaaaggctgagatcccacctgagaagtccatc
actctgtcctaccttatggccccaaggctggctcgccgtggtggagtggatgagcccttc
gcatgggaaagcaaagagtttctgagaaagctttgcattggcaaggaggtcacattcaga
gtggactatacagctcccaatattggacgagaatttggtactgtttatcttggtgacaag
aatgttgcatactcggtagtttctgctggatgggcaagggtaaaggagcaaggccccaag
gggggtgaacaaaatccataccttactgagctgctaaggttggaggaagttgccaagcaa
cagggtgttggtcgttggagcaaggaacctggtgctgctgaagagtccataagagatctt
ccgccatctgcaattggtgaagcaagtggttttgatgcaaagggttttgcagttgcaaat
aaaggcaagagtttggaggccattgttgaacaagttcgtgatggcagcaccgttcgtgtg
tacttgctccctagtttccagtttgtgcagatatatgttgctggagtacaggctccatcc
atggggaggcgctcatcagcacctactattgttgctgaaacggatggtactgctaatggt
gcaaatggtgaagattctgagggagcaccggctcagctgactacagcacaaagacttgct
gcatccgcagcttctgctgaaattccaccagataggtatggaagagaagccaagcacttc
acagagactagagttctcaacagagatgtgcgtattgtggtggaaggcacagacagcttc
agtaatataattggctctgtgtattaccctgatggagagactgcgaaggacttggccctt
gagcttgttgaaaatggtcttgcaaagtatgttgagtggagtgctaatatgcttgatgtt
gaagtcaaaataaagctgaagaacgcagaacttcaggctaaaaaggatcagttgagaatc
tggacaggctttaagccaccggtgacaaactcaaagcccatccatgatcagaaatttact
ggaaaagttgtagaggttgtgagtggggattgcattattgtagctgatgatgctgcccca
tatggtagtccttcagccgaacgtcgggttaatctctcaagcattagagctcctaggatg
ggcaatgctcgtagggatgagaagcctgacaattttgcccgtgaagctaaggagttcttg
cgcacaaggttgattagcaagcaagtggctgttgaaatggaatactctagaaggatcagc
actgtggatggacagaatgctgctcccacagcaaacacggctgataccagagttttagat
tatggttcagtttttctgggttcaccttcacaggctgatggagatgacgtgtcttctact
ccgagctctgccagccagcctggagttaatattgctgagcttttgctctctcgaggcttt
gctaaaacatcaaaacacagggattatgaggaaaggtcacactattatgatgctttatta
gcagctgaatcacgggctgagaaagcaaagaaaggagtgcattctctaaaagaatctcct
gtgatgcacataacagatttaacaacggtatctgcaaagaaagccaaagatttccttccc
ttcttgcaaaggaacagaagacattctgccgtcgttgagtatgtttttagcggccatcga
ttcaaactaacaattcctaaggagacttgcagtattgccttctcattatctggtgttcgg
tgccctggtaaaggcgagccatactcagatgaagctattgctttgatgaggagaagaata
ctacaacgtgatgtggagatagaggttgaagctgttgatagaacaggaacattcataggt
tcactgtgggagtccaagaccaacatgggctctgtacttttggaagctggcctggccaag
ctgagttcatttggcttggataggatctcagatgcatatgtcctaactagagctgagcag
tctgcaaagcaacaaaaacttaagatatgggagaattatgttgagggtgaagaggcttcc
aacggatccacacctgcttctaagcaaaaggaaattcttaaggtggttgtcacggaagtt
cttggtggtgggaagttctatgttcagacagtgggtgaccagagagtagcttcaattcaa
cagcagcttgcatctttgaaacttaaagatgcacctgtcattggtgcttttaatcctgtg
aagggagagatagtcctcgcacaatttagcctcgacaactcctggaacagagctatgatt
gtaaatggacctcgtgctgtagaatctccaaatgacaagtttgaagtattctatattgac
tatggcaaccaagaggtggttccctacagccgtttgcgacctgtggacccatctatttcc
tcgtctcctgctcttgctcagctatgcagccttgctttcattaaagtgcccagtctagag
gatgattttggtcaggaagcagcagagtatctgagtgaatgtttgctcagtagctcaaag
caataccgggcaatgattgaagaccgtgatacttctgggggaaaatcaaaaggacaagga
acaggaaatgttctcattgttactcttgttgatgcagagacggaaagtagcataaatgct
accatgcttgaggaagggcttgctcggcttgaaaggagcaagaggtgggacactagggag
aggaagacggctctccagaacctggagcagttccaggagaaagcaaagaaggaacggctg
cggatgtggcagtatggagatgttgaatctgatgaggacgagcaggctccagctgcaagg
aagcctgggggccgtcggtag
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