Panicum virgatum (switchgrass): 120703206
Help
Entry
120703206 CDS
T07260
Name
(RefSeq) ubiquitin-like-specific protease 1D isoform X1
KO
K16287
ubiquitin-like-specific protease 1C/D [EC:
3.4.22.68
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120703206
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.68 Ulp1 peptidase
120703206
Ubiquitin system [BR:
pvir04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
120703206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C48
RickCE_cat
Motif
Other DBs
NCBI-GeneID:
120703206
NCBI-ProteinID:
XP_039843151
LinkDB
All DBs
Position
4K:complement(13380019..13394861)
Genome browser
AA seq
577 aa
AA seq
DB search
MPMTAVSQEELPQEAGAANDEMQEREGVDADVRLLPDQVLREKARRIQDMFDKGTAGRLS
DRGKKLRLSLDAMHRELNRRQAPRGGARAPGGDGCERIVLSNCAESSDTRKASHRHHMDQ
VGRKPGSGLHSDPNRTKLSKADFQCSFGMDEKADVDISCLEITRSRNEPNASVENEGKLC
KEEDSCKPSSEPTNLFIEELHGDTSSNTEKISSYDASNNNDRNRICEATPTPTRKRKGAD
PANFSMRLRSRKEEVVLLDGDTPHPDSAEGTSNNRDAKKLYYPSREHPNSVEISSDDIRC
LQPESLLSSPIMNFYIMYLQGPMSPISRPRSEYHIFNTYFFSKLEAMTSKEDKTTYFLKL
RRWWKGVDIFEKAYMLLPVHAETHWSLVIICMPTKEDQAGPIILHLDSLKFHSSRLIFSV
VSRFLKEEWNYLNENVSSAECPLRETVWKNFPRKIEKKTIEVPQQQNDYDCGLFVLYYMQ
RFIQEVPKRLQKKDLSMFGKRWFRPEEPSQLRDEIRHLLQKCREADPKSYATELFGEAEP
KNDVTEPLTSEHLQETVDAATAKDHALIEIEETCSCD
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgccgatgaccgcggtctcacaggaggagctcccccaggaggcaggggccgctaacgat
gagatgcaggagagggagggggtcgacgccgatgtgcggctgttaccggaccaggtgctg
cgggagaaggcccggcgcattcaggatatgtttgacaaaggaacggccggccgcctctcg
gaccgcggcaagaagttgcgcttgtcgctcgatgccatgcaccgggagctcaatcgccgc
caggccccccgcggcggcgcacgagcgccgggtggtgatggatgtgaaaggatagtacta
tcaaactgtgctgaatcatctgatacaaggaaggcaagtcatcgccaccatatggatcaa
gtagggagaaagcctggatctggtttgcatagtgaccccaatagaactaaactatcaaag
gcggatttccagtgttcattcgggatggatgaaaaggcagatgtcgacatatcttgtttg
gaaataactaggagcaggaatgagcctaacgcttcagtagagaatgagggaaagttgtgc
aaagaggaagattcttgtaaaccctcttcagagcctacaaatttatttattgaagagttg
catggggacacctcatccaatacagagaagatatcttcttatgatgcatctaataacaat
gaccgcaataggatatgtgaagcgactcctacgcccactcgtaaaaggaagggagctgat
ccagctaacttttcaatgcgattgagatcaagaaaggaagaggtggttctccttgatgga
gacacaccccatccagattctgctgaaggaacatccaataaccgggatgcaaagaagcta
tactatccttcaagggaacacccgaattctgttgagatatcttctgatgacatcagatgt
ctccagcctgaatcattgctgtcctcacctataatgaacttctacattatgtatctacag
ggaccaatgtcaccgattagtagaccaagaagcgagtatcacattttcaacacatacttc
tttagcaagcttgaagccatgacatcaaaggaggacaagaccacttattttttgaagttg
agaagatggtggaagggtgtagatatatttgaaaaggcatatatgttgttgcctgtgcat
gcagaaacacattggagtctcgtaattatatgcatgccaacaaaagaagaccaagcaggt
cccatcatacttcatttggattctctgaagtttcatagtagcagattgattttcagtgtt
gttagcagattccttaaggaagaatggaactacctgaatgaaaatgtttcatcagcagaa
tgtcccttacgagaaaccgtgtggaagaactttcctcgtaaaattgaaaagaaaacaatt
gaggtgccgcagcagcaaaatgattatgattgtggcctgtttgtgctgtactatatgcag
cggtttattcaggaggtgcctaaaaggcttcagaagaaagatctttctatgtttggcaaa
cggtggtttcggcctgaagagccatctcagcttagagatgaaatccgccatttactccag
aagtgcagggaagccgatcctaagagctatgcaactgagttgtttggggaagctgaaccc
aagaatgatgtgaccgagccactaacgtcagagcacctgcaagagacagttgatgctgcc
acagcaaaagaccatgctttgattgaaattgaagaaacttgcagttgcgactga
DBGET
integrated database retrieval system
