Panicum virgatum (switchgrass): 120703225
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Entry
120703225 CDS
T07260
Name
(RefSeq) transcription termination factor MTERF8, chloroplastic-like
KO
K15031
mitochondrial transcription termination factor family protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pvir03012
]
120703225
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120703225
Translation factors [BR:
pvir03012
]
Eukaryotic type
Release factors
120703225
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
120703225
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
mTERF
DUF1127
Motif
Other DBs
NCBI-GeneID:
120703225
NCBI-ProteinID:
XP_039843181
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Position
4K:13792384..13796786
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AA seq
390 aa
AA seq
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MAVSHLRAALSRILRSPSRLLASSHTPPLFLHSSAAAASSSGSFAAEDYLVSRCGLTQAQ
ALKAAAKISHLPSSAKPDAVLAYLESTLRIPAADVARVVLMDASFLCADVEQTLSRRIAD
LHDLGLSRDQIARLLPLVPNSFRNRFLRSNLEFWLAEIGSFDKLLWVLRSCNSLLGMDLE
KVARPNVAFLRQCGQDISEIAGSNLYISRIFTMKPELLKETVQRAEELGVERSSRMLSRA
LAVVAFVDKEVIDRRIQLLHNLGFSKDDVLAVVRKQPLVLGLSEQKIQGNVDFLTKDVGL
ELSYIVRRPVLLMYSVERRLLPRHCLLKVLREKGLVKGKPDCLGTASIGEKIFVEKYVRP
FKNHVPGLTDDYASKCWRKAMDGIRSQKTD
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctcccacctgcgggcggccctctcccgcatcctccgctcgccatcccgcctc
ctcgcctcctcgcacacccctcccctcttcctccactcttccgctgccgccgcgtcctct
tccggctccttcgcggcggaggactacctcgtctcccgctgcggcctcacccaggcgcag
gcactcaaggccgccgcgaagatctcccacctcccgtccagcgccaagcccgatgccgtg
ctcgcctacctcgagagcaccctccgcatccccgccgccgacgtcgccagggtcgtcctc
atggacgcttccttcctctgcgccgacgtggagcagaccctgtcccggcgcattgccgac
ctgcacgacctcggcctgtcgcgggaccagatcgcgcgcctccttcccctcgtccccaac
tccttccgcaacaggttcctccggagcaatctcgagttctggctcgccgagatcgggtcc
ttcgacaagctcttgtgggtcctcaggtcgtgcaacagccttctcggcatggatctggag
aaggttgccaggcccaacgtggccttcctccggcaatgcggccaggacatttctgagatt
gctggctccaatctctacataagtcggatcttcaccatgaaaccggaacttctcaaggag
actgtccagcgagcggaggagttgggcgtcgagcgtagctccagaatgttaagccgcgcg
cttgctgtggttgcttttgtggacaaggaggttattgacaggagaatacagctgttacac
aaccttgggttctcaaaggatgatgtgctggcggttgtgaggaagcagcctctcgttctg
ggcttgtccgagcaaaagattcagggaaatgtggatttcttgacgaaggatgtcggtctg
gaattatcctatattgtgcgaagaccagtgctgctcatgtatagtgttgaacggcggttg
ttgccccggcattgcttgctcaaagttctcagggagaagggtctggtgaagggtaagcca
gactgcttgggcactgcctcaataggtgagaagatttttgtggagaaatatgtgcgtcct
ttcaagaaccatgtcccaggcctcaccgatgactatgcctccaaatgttggaggaaggca
atggatggaattcgcagccaaaagactgactga
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