Panicum virgatum (switchgrass): 120703289
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Entry
120703289 CDS
T07260
Name
(RefSeq) putative BPI/LBP family protein At1g04970
KO
K05399
lipopolysaccharide-binding protein
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120703289
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120703289
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
120703289
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GFIT
Motif
Pfam:
LBP_BPI_CETP_C
LBP_BPI_CETP
Motif
Other DBs
NCBI-GeneID:
120703289
NCBI-ProteinID:
XP_039843247
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Position
4K:15051304..15055027
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AA seq
492 aa
AA seq
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MAQLYPHPLLLLLFLLAAAGVSAGGSDGAHVSAVVAEKGLAFAKDVLIGEAVRSLTPLRL
PGVEKALRVPFLGGVRVAASNITLFHLDVGGNSTVHPGGSGLVVVASGITANISMHWSYR
YDSWLLPIEISDSGTASILVQGMEVGITMVIKNSNGSLALSVLHCGCYVKDLVISLDGGA
SWFYQGFINAFEDHIKAAVEKAIPENIIEGAGKLDSFLQGLPRTVSLDDVAALNMTFVND
PHYGNSSIEFDINGLITSAVAKTTNNLQKHPHLSLSCGGASKMLSLSLDEDVFNSALDVY
FKAGSMHWVVDKVPDQSLLNTASWKFIIPRLYWNYPNDDMLLNISMASSPVIKITSEKIG
ATINADMIIDVIDGKQTVPVACISVVVSASGVVETSGNKVYGRVGLDDFSLALKWSKIGN
IYMSLIQGVIRVFLNTVCMPYLNSRLGNGFVLPVVHGFTLQDVYILTSAERLTLCSDVIF
TNASSLASLAFL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggctcaactctatccccatcccctccttctcctcctcttcctcctcgccgccgccggg
gtgtccgccggcggctcggatggggcgcacgtctccgcggtggtcgcggagaagggcctg
gcgttcgccaaggatgtgctgatcggggaggcggtgcggtcgctgaccccgctgcgcctt
cccggggtggagaaggccttgcgcgtgcccttcctcggcggcgtccgcgtcgccgcctcc
aacatcacgctcttccacctcgacgtcgggggcaactccactgtccaccccggaggctcg
ggcctcgtcgtcgtcgcctccggcatcactgccaacatcagtatgcactggagctatcgc
tacgactcgtggttgttgccgatagagatctccgacagcggcaccgcctcgatcctggtt
caaggaatggaagtcgggataacaatggtaataaagaacagcaatgggagcttggctcta
tctgttttgcattgtggttgctatgtgaaggacttagtgatatccctggatggtggtgca
tcttggttttatcaagggtttataaatgcttttgaagatcatattaaagctgcagttgag
aaggcaatacctgaaaatattattgaaggggctgggaaactggactcatttctgcaaggt
cttcctagaactgttagtctggatgacgttgctgccttgaacatgacttttgttaatgat
ccgcactatggcaattcttcgattgagtttgatatcaatgggttgattacttcagcagtt
gctaagacaaccaataatctgcagaagcatccacacctttctttatcgtgtggtggtgca
tccaaaatgctttcgctttcacttgatgaagatgtatttaattcggcattagatgtttat
tttaaggcaggttcaatgcattgggttgttgacaaagtccctgaccaatctctactgaac
acagctagttggaaatttatcattcctcgcttatactggaattacccaaatgatgatatg
ctgctaaatatttcgatggcctcatccccagtgataaagattacatctgaaaaaattggg
gctaccattaacgcagacatgataattgatgttatagatggcaagcagacagttccagtt
gcatgcatctcagtggttgtaagtgcttcaggcgtcgtggagacatcgggaaataaagtt
tatggtagagttggattagatgatttctccctcgcgttgaagtggagcaaaattggtaac
atctatatgtctttgatccagggtgtgattcgtgttttcttgaatacggtgtgcatgccc
tatttgaactcacggctggggaatgggtttgtcctgcccgtggtccacggtttcacactt
caagacgtctatattctaacttctgctgagcggttgacgctttgttctgatgtcatcttc
accaatgcaagcagcttggcgagtttagcatttttgtga
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