Panicum virgatum (switchgrass): 120703319
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Entry
120703319 CDS
T07260
Name
(RefSeq) proteasome activator subunit 4-like isoform X1
KO
K06699
proteasome activator subunit 4
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
120703319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pvir03051
]
120703319
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Regulatory particles
PA200
120703319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_PSME4_mid
PSME4_C
HEAT_PSME4
CLASP_N
Motif
Other DBs
NCBI-GeneID:
120703319
NCBI-ProteinID:
XP_039843270
LinkDB
All DBs
Position
4K:complement(16623662..16645148)
Genome browser
AA seq
1809 aa
AA seq
DB search
MHLYNAWLPPPVAAAARGEAAAFAGAVRAAANAWRPGDPDSAYATLKWISVFDLFIKAKS
DISPEDVQDLVKLGLEIFHASQNKFVVQIKWGGLLIRLLRKHRKRLLLDVQWRPLYDTLI
KTHFKRNMGPEGWKVRKQHFETVTSLVCASRNFFPEGVAAEIWSEFRPLLDNPWHNSAFE
GVGFLRLFLPANSRNQDHFTIDWIAQCLDIWDSVTNCNFWDIQWASIIARCIKNFRSVNW
DDYLPLLFTRYLNMFAVPISSGNGSYPFPVEVPGNTRFLFSSKTRSLAKAIAKSIVYLLK
PKSLAFEHFEKLINFLEQFYHPSNGGRWTYSLERFLRHLVVYFEKRLQLEQFDATVEEHD
RLGKEERVIFIKVILKLLDRGQYSKDNSLAETVSIATSILSYVEPTLVLPFVTTNFQLAL
ETTTATHQLKNAVTSVAFSGRALLLCSLCSSQSDDSSVVDSFSDLIATSLSNALLGMDAN
DPPKTIATMQLIGSIFSNLATVGANDDAPAFLQSTTLSNWLDEFFSRLFSVLQNLESSSP
INEGYQTSFMSGTFLAEDSSYYFCMLEILLGKLSKPLFDQSLKRIAKFVKANILPGATSE
VGLLCCACVHSYPEEASFHLFKPILMIIMSSFEGTPTTGYVGRAFPDKTSKKAALSPALE
TALDYYLRVLAIAISYAGPVLLNYKEELNHIITSAFQAPSWKVNGAGDYLLRSLLGNLVS
YYPIDQYKPFTCQPGNIIEPWGCSKAHQDREVEMLNFPPKWHDPSQDELSFANELLQFHF
QSALDDLLTICQTKLHSETAGDEKEHLKVTLLRIFSALHGVMSCLPEMRPSYKDGRSKEV
EPIFFIAGCTGSTVGSSEMREKAAEFVHIACRYLLKERTDDSILLALVVRVIDALVNYGS
LEYLEWSRHLQAWKVESASIIEPPCNFIVPFHAQGKKRPRWALVDKANLHSTWRCSQSSY
HRYRTNAEVSPSGLMTDLMNDLLDLSLHNYEIVRSYAGRSLTKLLKRWPSLISNCVLTLA
GNLRDPKAPEHVVLGSCSILSSQTVLRHLTTDFVSLSSFIMGILESSHHESLKCQKAITE
LFVMYNIRFSGISRSFFKNSESHVDKSGFLSLVRQINALGFESNSLHWRYNLMANRVLLL
LILASKSESGVYSQMLAETAGHFLKNLKSQLPHSRMLAISALNTLLQGSPHKAYPQDSHQ
SLDHPEYCNISSTGEILNQIIQEEGFMNETLNCLSHVHIFSDNDGSSKASYGASSFQSGS
DKAITDFYFDFSASWPRTPSWISLVGGHMFYSSFARIFKRLIQQCGVPVISSLQTALEDF
LSSKERARQCVAAEAMAGMLHSDITGNLESQNNWLMVQLQKIMLVPSVESNPEWAACIRY
AVTGKERSGTRAPVLRQKVLECLCSPVPQSMATSVLAKRYAFLSVSLIEISAPKMTPAEK
QYHVKIVDELLDNMNHSSAQVREAIGVAMCVTCSNMRLGGSFGPGSQEELCGDVSMIEQT
GNEYWSKCLTDGANELAVSIQNSIQSKQLESTSDSATENSMDHRESSDAKRMETIFHFMI
ASLRSGRSSVLLDIIIGLVYPVLSLQETSNKDLSLLAKSAFELLKWRILHRPFLETAISS
ILSSVNDPNWRTRSALLSYLRTFTYRHTFILSGSEKSLIWQTIEKLLVDNQVEVREHAAG
VLASLMKGIDEDLSKDFRDRSFAKAQRIIVARRRTSKLGHSIATIHGTVLALTASVLSVP
YDMPSWLPAHVTLLARFISEPSPIRSTVTKAVAEFKRTHADTWSIQKDAFTEDELEVLRD
TSSSSSYFA
NT seq
5430 nt
NT seq
+upstream
nt +downstream
nt
atgcacctctacaacgcgtggctgccgccgccggtggccgccgcggcgcgcggggaggcg
gcggcgttcgcgggcgcggtgcgggcggccgccaacgcgtggcggcccggcgaccccgac
tccgcctacgccacgctcaagtggatctccgtgttcgacctttttattaaagcgaagagt
gatatttctcctgaggatgtacaggatcttgtaaagcttgggttggagatatttcatgca
tctcagaacaagtttgttgtccagattaagtggggaggtttgctcatcaggcttttaaga
aagcacaggaagaggcttttacttgatgtgcaatggaggccgctgtatgatacattgata
aagactcatttcaagagaaacatggggcctgagggctggaaagtaagaaagcaacacttt
gaaactgtcacctccttggtgtgtgcatctaggaatttctttcctgaaggtgtggccgct
gagatttggtcagagttcaggcccttgctggataatccatggcataactcagcatttgaa
ggtgttggatttctcaggctgtttcttcctgcgaactcaaggaatcaggatcactttacg
attgattggattgcacaatgtcttgacatatgggattctgtcacaaattgtaacttctgg
gatattcaatgggcttccatcatagcacgctgtataaaaaattttagatcagtgaactgg
gatgattatttgccgttgctattcacaagatacttgaacatgtttgcggtgcctatatca
agtgggaacgggtcatacccctttccagtggaggttcctgggaacacgcgatttttattt
tccagtaagacaagatcacttgccaaggcaattgcaaagtccattgtataccttttgaag
cctaaaagtttagcattcgagcattttgagaagctcattaattttttggaacagttctat
catccatcaaatgggggtcgatggacctactcactggagcggttcctgcggcatcttgtt
gtttactttgaaaaacgccttcaacttgaacaatttgatgcgacggttgaggaacatgat
cgtcttggaaaggaagaaagagttatttttatcaaagttatattgaaattactggatcgt
ggtcagtacagcaaagataattctcttgctgaaacagtttccattgcaacttccatcctg
tcttatgttgagccaacccttgtgcttccgtttgttacaacaaacttccaactagcttta
gaaacaactacagcaacccatcaattgaagaatgctgtcacatctgttgcattttctgga
cgtgctcttcttctgtgttctttatgttcatcccagtctgatgatagtagtgttgtcgat
tcattcagtgatcttattgccacttccctttcaaatgcattacttggcatggatgccaac
gatccacccaaaactatagctacaatgcagttaattggttccatattttcaaatctagct
acagttggtgctaatgatgatgcgcctgcatttctccaatctaccactttatcaaactgg
ctagatgagttcttttcccggctgttttctgtgcttcaaaatttggaatcaagtagtcca
attaatgagggttaccaaacctctttcatgtcagggacctttcttgctgaggacagctca
tattacttctgcatgcttgaaattcttcttgggaagttatcaaaacccttatttgatcag
tccctgaagagaattgccaagtttgttaaggcaaatatcctccctggtgctacttcagaa
gttgggcttctttgttgtgcctgcgttcattcatatcctgaggaggcttcattccatctt
tttaaaccaatcttaatgattatcatgtcctcctttgagggcaccccaacaacaggttat
gttggaagagcatttcctgataaaacgtctaaaaaggctgcactttctcctgccctggaa
acagcattagactactatctgagggttttggccatagccatcagttatgctggtcccgtg
ttactcaattataaggaagaattaaaccatataataacgtctgcgttccaggccccttca
tggaaggtcaatggagctggggattatctccttcgttctctgctaggaaatttggtttcc
tattatccaatagatcagtacaagccattcacttgtcagcctggtaatattattgaacca
tggggctgttcaaaagctcatcaggatagggaggttgaaatgcttaatttccctccaaag
tggcatgatcccagtcaagatgaactttcttttgcaaacgagttactacaatttcatttc
cagtcagctttagatgatcttttgactatttgtcagacaaaacttcattctgagacagca
ggagatgagaaggagcacctaaaagtaactctattacgcatcttctctgcattgcatggt
gtcatgtcttgcttgccagaaatgcgcccatcatataaagacgggcggtcgaaggaagtg
gagcccatattcttcatagcaggatgtactggcagcactgttggcagctcagaaatgcgt
gaaaaggctgcagaatttgtgcacatagcttgcaggtacttattaaaggaaagaactgat
gacagtattctcctcgcacttgttgtgcgcgttattgatgctttggtaaactatggcagc
ttggaatatctagaatggtcacgccatttacaagcttggaaagtagagtctgcttctata
attgagcctccatgcaacttcattgttccatttcatgctcaaggaaaaaagagacctaga
tgggcacttgtcgacaaagcaaacttgcatagtacatggagatgttcacaatcatcatat
cacagatacagaacaaatgcagaagtatctccatctggcctcatgactgatttgatgaat
gatctcttagatctctcactgcacaactatgaaattgttcgctcgtatgctggaagatct
ttaacaaaattgttgaagcgctggccttctctaatttctaactgtgttctcacacttgct
ggaaatttgcgcgacccgaaagctcctgagcatgtggtgcttggttcttgcagcatcctg
tcatcacagactgttttaagacacttgaccactgatttcgtttctctctcgtcatttatc
atgggcattctggaaagctctcaccatgaatcgttgaagtgtcagaaagctattaccgag
ctctttgtaatgtataatatacgtttctctggaatatcaaggagtttctttaaaaactct
gaaagtcatgtcgacaagtcgggatttctcagtttagttcgtcaaatcaatgctttgggc
tttgagagcaacagcctgcattggaggtacaatttgatggccaacagagtacttctgctg
ctaattttggcatccaaaagtgaatctggcgtatattcacaaatgctggcagagactgct
ggtcatttcttaaagaatttgaagagtcaactgccccactcgagaatgcttgcaatatct
gcgctgaacacattattgcaaggatcgcctcataaggcatatccacaagattcacatcaa
tcactagatcaccccgaatattgcaatatttcatcaacaggagaaattttgaatcagatt
attcaagaggaaggattcatgaatgagacactgaactgtttatctcatgtccatattttt
tctgataacgatggttcctcaaaagcgagttatggtgcttcatcttttcaaagcggatct
gacaaagcaatcactgacttctattttgatttctctgcctcgtggccacgtactcctagt
tggatttctttagtgggtggtcacatgttctattccagctttgctaggatattcaaaagg
cttatacaacaatgtggcgtgccagtaatatcttctcttcagacagcactggaagatttt
ctaagttctaaagagagagcaaggcaatgtgtagctgctgaagccatggcagggatgctc
cactctgatatcactgggaatttggagtctcagaataactggctgatggttcaactgcag
aagattatgttagtaccatctgtggaatcaaatcctgaatgggcagcttgcattcgatat
gctgttacaggaaaagaaagatccggaactcgtgctcctgttctcagacaaaaagtatta
gagtgcttatgtagtcctgttcctcaatccatggcaactagcgtacttgccaagagatat
gcgtttctatctgtttctctaatagaaatatctgcaccaaaaatgactccagcagagaag
caataccatgttaaaattgttgatgaactacttgacaacatgaaccattcatctgcacag
gtaagagaagcaattggtgttgccatgtgtgttacatgctcaaatatgagacttggtgga
tcatttggccctggttcacaagaagagctttgtggggacgtaagcatgatcgaacagaca
ggaaatgaatattggtctaaatgtttgacagatggagctaatgaattagctgtaagtata
caaaacagtattcaatctaagcaactggagtcaacatcagattcggctactgaaaatagc
atggatcatagagagtcgtctgatgctaaaaggatggaaacgatttttcatttcatgatc
gcatctttgaggtctgggagatcttctgttctactagatattattattgggctcgtgtac
cctgttctctcactacaggaaacatcaaataaggacctttcattgctcgctaaatcagct
tttgagttgctcaagtggaggattctacatcggccatttcttgaaactgctatttcgtct
attctttcttcagttaatgatcctaactggcgcaccagatctgcgctgttatcatacctc
aggacctttacatacaggcacacattcatcctttctggttcagagaaatcactaatctgg
caaacaatagagaagttgcttgtggacaaccaagttgaggttagggaacatgctgctggt
gttcttgcaagcttgatgaagggtatagatgaagatctatcaaaggatttccgtgatagg
tcatttgcaaaagcccagcgtattattgttgcgcggagaagaacttcaaaattgggccac
tctattgctaccatccatggtactgtgcttgctttgacagcttcggtcctttctgtccca
tatgacatgcctagctggcttcctgctcatgtcacgctactcgctcgcttcatcagcgag
ccttcccccataagatcaaccgtaacaaaagctgttgcggagtttaagcgtactcatgct
gacacatggagcatccagaaggatgcgttcacggaagacgaactggaggttcttcgtgat
acatcctcatcctcatcatactttgcctag
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integrated database retrieval system
