Panicum virgatum (switchgrass): 120703381
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Entry
120703381 CDS
T07260
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1-like
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120703381
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
120703381
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120703381
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
120703381
NCBI-ProteinID:
XP_039843367
LinkDB
All DBs
Position
4K:18642958..18647364
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AA seq
508 aa
AA seq
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MGWKVAPGGKAAAAGEKLRLPASSAAARSRMKLWVVRATTTVLLWTCVVQLTAVGDTWGP
RVLKGWPSCLTAPEEEAAAAALPGAAAARPQPVVEKAVLPPKRIYRNNGYLMVSCNGGLN
QMRAAICDMVVIARYLNVTLVVPELDKTSFWNDPSEFQDIFDVEHFITSLRGEVRILREL
PPRVKRRVELGMFYSMPPISWSDISYYQNHILPLIRKYKVLHLNRTDARLANNGLPIEIQ
KLRCRVNYASLRFTPQIEELGKRVIRILRQNGPFLVLHLRYEMDMLAFSGCTQGCSNEEA
EELTRMRYAYPWWKEKVIDSDLKRKDGLCPLTPEETALVLRALDIDRSMQIYIAAGEIYG
GKRRMAALTSAYPNVVRKETLLEPSDLMFFQNHSSQMAALDYLVSLESDIFVPTYDGNMA
KVVEGHRRFMGFKKTVLLDRKLIVELVDRYTNGSLQWDEFSSLIKAAHAKLMGSASKRMV
IPDRPKEEDYFYANPQECLQDLDLLQTS
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggggtggaaggtggcgccagggggtaaggcggcggccgccggcgagaagctcaggctc
cctgcctcctccgccgccgcgcgctcgcggatgaagctctgggtcgtgcgcgccaccacc
acggtgctgctctggacctgcgtcgtccagctcaccgccgtcggcgacacctggggcccg
cgggtgctcaagggctggccgtcctgcctcaccgcgcccgaagaggaggccgccgcagcc
gcgctccccggcgccgcagccgcgcgcccgcagcccgtcgtcgagaaggccgtgctgccg
cccaagagaatatatagaaacaatggttatttgatggtttcgtgcaatggtgggcttaac
cagatgcgagctgcaatatgtgacatggttgtaattgcaaggtatttgaatgtcacttta
gttgtgccagagttggacaagacttcattttggaatgatccaagtgagttccaagatata
tttgatgtcgagcactttataacctcattacgaggcgaagttcgcattctgagagaattg
cctccaagggtaaagagaagggttgaacttggaatgttttactccatgccaccaattagt
tggtctgatatttcctactaccaaaatcatattcttcctttgattcgaaagtacaaagtt
ctccatctgaatagaactgatgcaaggcttgcaaacaatggtttacctatcgagattcag
aaactacgatgccgagtaaattatgcctccctcagatttaccccacaaattgaagaattg
ggcaagcgagtaattagaatacttcgccaaaatggccctttcttggtccttcatttacgt
tatgaaatggatatgctggcattctctggctgtacacaaggttgcagtaatgaagaggca
gaagagctcacaagaatgaggtatgcttatccgtggtggaaagagaaggtgattgactca
gacttgaaaagaaaagatgggctttgcccattgacaccggaggagactgctcttgtcctc
cgagcattggacattgatagaagtatgcaaatatacattgctgctggagaaatatatggt
ggaaagcgcaggatggctgctctaacttcagcatacccgaacgtggtgaggaaggagaca
cttttggaaccttctgatctgatgttcttccagaaccattcatcacaaatggcagcactg
gattatttggtatctttagaaagtgacatatttgttccaacatatgatggcaatatggct
aaagtcgttgagggtcatcggagattcatgggtttcaagaagacagtcttattagaccga
aaacttattgttgagctagtagaccggtacaccaatggttctctgcaatgggatgagttc
tcttcattgatcaaggctgcccatgcaaagctgatgggatcagcttcaaagaggatggtg
attcccgacagacccaaggaagaggactacttctatgccaatccccaagaatgcctccaa
gatcttgatcttctacagacatcatga
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