Panicum virgatum (switchgrass): 120703389
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Entry
120703389 CDS
T07260
Name
(RefSeq) probable starch synthase 4, chloroplastic/amyloplastic
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120703389
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120703389
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
120703389
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Storage polysaccharide
120703389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
MRP-L47
DUF1688
Glyco_trans_4_4
4HFCP_synth
Motif
Other DBs
NCBI-GeneID:
120703389
NCBI-ProteinID:
XP_039843376
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All DBs
Position
4K:complement(18797178..18805413)
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AA seq
910 aa
AA seq
DB search
MACSAAVAGAEATALLCRRPAPSLIAGRNILAVSRRPRHCNLRTGAQPPQKTTSSANYRN
RVNFQRDRAGASSDDEQQQKSGDENGLPNIQLEDLVGKIQNTEKNILLLNQARLQALERA
DKILKEKEALQQEINILEIKLSETGAQSELSTKGMSDAEALEFDVLKEENMLLKDDITFL
KAKLIDITEKEESLFKLEKERALLDSSLRELECAFIAAHSDMLKLGPMQHDAWWEKVENL
EELLESTANQVEHAALILDGYHAFQDKVDKLEASLGATNISEFCLYLVDLLKKRVKSIEE
RFQACNREMHSQIELCEHSIVEFHDTLSKLIKESEKKSMEHYQEGMPSEFWSRISLLIDG
WSLEKKISNDDANILREMAWKRDNRLREAYLSSRGMAERELIDSFLKMALPGTSSGLHIV
HIAAEMAPVAKVGGLADVISGLGKALQKKGNLVEIILPKYDCMQHNQINNLKVLDVVVQS
YFEGNMFANKIWTGTVEGLPVYFIEPQHPGKFFWRAQYYGEHDDFKRFSYFSRVALELLY
QSGKKVDIIHCHDWQTAFVAPLYWDVYANLGFSLARICFTCHNFEYQGTAPAQDLACCGL
DVERLDRPDRMRDNSHGRINVVKGAIVYSNIVTTVSPTYAQEVRSEGGRGLQDTLKIHSK
KFVGIINGIDTDTWNPSTDRFLKVQYSANDLYGKSANKAALRKQLKMSSANASQPLVGCI
TRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPVPNIQREFEGIADQFQNNSNIRLLLKY
DDALSHMIFAASDMFIVPSMFEPCGLTQMIAMRYGSVPVVRRTGGLNDSVFDFDDETIPM
ELRNGFTFLKADEQGFDSALERAFNYYHRKPEVWKQLVQKDMKIDFSWDTSASQYEDIYQ
RAAAQARAAT
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggcttgctccgcggcggtggcgggcgccgaggcgactgctctcctgtgccgccgccct
gctccatcattgatcgccgggcgcaacatccttgcggtgtcccgtcggcctcgccactgc
aatctcaggactggcgctcaacctcctcagaagaccacatctagtgctaactaccgtaac
agggttaattttcagagagatagagcaggagcttccagtgatgatgaacagcaacagaag
tctggagatgaaaatggcctaccaaatattcaactggaagatttggttggaaagatacaa
aacactgagaagaatattttgcttctgaatcaagctcgtcttcaggcattggaacgtgct
gacaaaattcttaaagagaaggaagctttgcaacaggagataaacattttggagataaaa
ttatcagaaacgggtgcacaatctgagctttctaccaaagggatgtctgatgcagaggct
ctggagtttgatgtactaaaggaagagaatatgctactgaaagatgacataactttttta
aaagcaaagcttattgatataactgagaaagaagagagtctattcaagctggagaaagag
cgtgctcttttagattcttcccttagggagctggagtgtgcattcatagctgcccattct
gatatgttgaaacttggtcctatgcaacatgatgcctggtgggagaaagtagaaaatttg
gaagaattgcttgagtccacagcaaaccaagttgagcatgctgctctgatactcgatggc
tatcacgccttccaggataaggttgacaaactagaggcgtcattgggagcaacaaacata
tcagagttctgtctttatttggttgatcttttgaagaaaagggtaaaatcaatagaagaa
cgcttccaagcttgtaatcgtgaaatgcattctcaaattgaactttgtgaacactcaata
gtggagtttcatgatactctcagtaaactaataaaggaaagtgagaagaagtcaatggag
cattatcaggaaggcatgccatcagaattctggagtaggatctctcttttgattgatggg
tggtcacttgagaagaaaatatccaacgatgatgcaaatatattaagagaaatggcttgg
aaaagggataatcgccttcgggaagcatacttgtcatctagaggaatggcagagagggaa
ctgatagatagttttctaaagatggcactaccaggaaccagttctggtttgcacattgtc
cacatagcagcagagatggctcctgttgcaaaggttggtggtctggcagatgtgatctct
ggtcttgggaaggcacttcagaaaaaggggaacctagtagagataattcttcccaaatat
gactgcatgcagcataaccaaatcaataatcttaaggttctagatgttgtggtgcagtcc
tactttgaggggaatatgtttgccaacaaaatatggaccgggaccgttgaaggacttcct
gtctactttattgagccgcagcatccaggcaagttcttttggagggcacaatactatggg
gagcatgatgacttcaaacgtttttcctactttagccgtgtggcactggaattgctttac
caatctgggaagaaagttgacataattcactgtcatgactggcagactgcatttgttgca
cctctttattgggatgtatatgcaaatcttggcttcagcttagctagaatttgttttacc
tgtcacaattttgaatatcaaggaacggctccagctcaggatttagcatgctgtggcctt
gatgttgagcgcctagatagaccagacagaatgcgggataattcacatggcagaataaat
gttgtcaagggtgcaattgtgtattccaacattgtcacaactgtatcaccaacatatgct
caagaggtgcgctcagagggtgggcgtgggctccaagatacacttaaaatacattccaag
aaatttgttggaataattaatggcatcgacacagatacatggaatccttctacagatagg
tttctcaaggtccaatacagtgctaatgatctatatggaaaatcagcgaacaaagcagct
ctcaggaagcagctcaagatgtcgtctgcaaatgcttcccaaccactcgtcggttgcatt
acaaggcttgttcctcaaaagggtgtacatctcatcaggcatgcaatatataaaacagct
gagttaggtggacagttcgttctcctaggttctagtcccgtaccaaacattcagagggag
ttcgagggtattgcagaccaatttcagaacaatagcaatatcaggctgcttttgaagtat
gatgatgctctatcgcatatgatttttgcagcatcagacatgttcattgttccttctatg
tttgagccatgtggtctcactcagatgatagctatgcgctatggttctgtgccagttgtt
cggagaactggtggtctgaatgacagtgtcttcgatttcgacgatgaaacgatacccatg
gaactgcgaaatggcttcacctttttgaaggctgatgagcagggctttgatagtgctttg
gaaagagctttcaactactaccataggaaacctgaagtctggaaacagttggtacagaaa
gacatgaagatagatttcagctgggatacttcagcctcccaatacgaagacatctaccag
agagcggctgctcaagcaagggcggcaacataa
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