Panicum virgatum (switchgrass): 120703403
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Entry
120703403 CDS
T07260
Name
(RefSeq) heat stress transcription factor A-3-like
KO
K09419
heat shock transcription factor, other eukaryote
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120703403
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
120703403
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
CC_Bre1
Rab11-FIP3
Seryl_tRNA_N
LRRFIP
Nup88
APG6_N
PBECR2
PEP-utilisers_N
PSME4_C
Motif
Other DBs
NCBI-GeneID:
120703403
NCBI-ProteinID:
XP_039843408
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Position
1K:complement(33581823..33585437)
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AA seq
562 aa
AA seq
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MAGHGMSVPLPPEAYKFLAAPPLAAHFLLLLLPHLLSPVHPPRPRARRPPSHAAMDRADA
GGSSSISDPDAPYSAAAALLLEPKLEDEELPLRQLASPGPFVPLDQLMPPAAEPPRPLEA
LLQGPQLPPFLSKTYDLVSEPALDVIISWGAAGNSFVVWDPSTFARDVLPHNFKHNNFSS
FVRQLNTYGFRKVHADRWEFAHEDFLRDSKHLLKRIVRRRSSPTQQSSIQPGLSSGESSL
DPELHTLRREKNALLEEVARLKQEHRQTIEQMSTLNHRLESAEDRQKQMVSFLAKLLQNP
SFVRQLKLHREQKEIDSIRVKRKFLKHVPHSSIESGESSSQHGGDSGSQFPASSPMDTSA
HDDIAELQNFLLEDDDLNFGMDPDNIGLDRVEQPDDIGVLVQSFDTQEELELGSGAQLLE
MPPASGPLGQDPTIGRSKGKSVLCPGLDATSSEASYLGSISDTMGALSGTMLGTASTMMD
ADEEQMWGVDASAPLQSTCSGSSQQTFSSLASDPYLMDIANKPDKFWDLDFQTLEQGDLQ
LDKCAIDDPTLQQQQQRNMKDP
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggccggccacggtatgtcggttccgctcccacccgaagcctataaattcctcgccgcc
ccgcccctcgccgcccatttcctcctcctcctcctcccccacctgctctcccccgtccac
cctccacgcccgcgagcccgccgccccccgtcgcatgccgccatggaccgcgccgacgct
ggcggcagcagtagcattagcgaccccgacgcgccctactccgcggcggccgcgctgctg
ctggagcccaagctcgaggacgaggagctgccgctgcggcagctggcgtcgccgggcccc
ttcgtgcccctggaccagctgatgccgccggcggccgaaccgccgcgcccgctcgaggcg
ctgctgcagggcccgcagctgccgccgttcctctccaagacctacgacctggtgagcgag
ccggcgctggacgtgatcatctcctggggcgccgcggggaacagcttcgtcgtgtgggac
ccctccaccttcgcgcgcgacgtgctgccgcacaacttcaagcacaacaacttctccagc
ttcgtcaggcagctcaacacctatggtttccgcaaggttcatgctgacagatgggagttt
gctcatgaagatttcctgcgagatagcaagcatctgttgaagagaattgtcaggcgcagg
tcctccccaacacaacaaagcagtattcagcctggcttatcttctggagaatccagcttg
gaccctgagctccacacactgaggagagagaagaacgcactgcttgaagaggtagccagg
cttaaacaggagcatcgtcagacaattgagcaaatgagcacactgaatcacaggctggag
tcggcggaggacaggcagaagcagatggtctctttcctggccaagctccttcagaatcca
agcttcgtgaggcaactgaagctgcatagggagcagaaggagattgactccatcagggtg
aaaaggaagtttctgaagcatgtaccacatagcagtatagagtcaggtgagtccagctca
cagcacggcggagatagtggttcacaatttcctgcgagttctcccatggatacaagtgct
cacgatgacattgcagaacttcagaattttctcttggaagacgatgacctcaactttggt
atggatccagacaacattggtcttgacagagtcgagcaaccggatgacatcggggtactg
gttcagagctttgatacacaagaagaacttgagctcggcagtggagctcaactactggag
atgcctcctgcttctggtcctcttggtcaggatcccaccatcggcaggtccaagggtaag
agtgtgctgtgtccaggattggacgctacctcttctgaagccagctatctcggatcaata
tcggacactatgggggcgctttcaggtaccatgctagggacagcaagcacaatgatggac
gctgacgaggagcaaatgtggggcgtggatgcttcagcgcctctgcaaagcacttgcagc
ggctctagtcagcaaaccttcagtagtcttgccagtgatccctatctgatggacattgcc
aacaagcctgacaaattctgggaccttgattttcagacactcgaacaaggtgatctgcag
ctggacaagtgtgctattgatgaccctactcttcagcagcagcaacaacgaaacatgaag
gatccctag
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