Panicum virgatum (switchgrass): 120703452
Help
Entry
120703452 CDS
T07260
Name
(RefSeq) protein MICRORCHIDIA 6-like isoform X1
KO
K24135
MORC family CW-type zinc finger protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120703452
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120703452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Morc6_S5
HATPase_c_3
HATPase_c
COG3_N
Motif
Other DBs
NCBI-GeneID:
120703452
NCBI-ProteinID:
XP_039843479
LinkDB
All DBs
Position
4K:complement(20562016..20575643)
Genome browser
AA seq
1055 aa
AA seq
DB search
MIVDFVDLSSDDDDDAREEHSVIGKGHSVHVKADFVDLTRDEDIFEGEHLAYGQGDAARV
TSFLKQQFFADDVQAEAAQCTVTLQTQELIADDGQGDAAQCTATLQMQEHTEDDGQGDAS
QSIAILKMQELRADHEQGDAVQYTAALQLQELRTDDERGDAAHCATTLQRQELTAEVGHG
DATQCIATLQMQKQLIADDVQGDASQCATLQMQELTAGVGQSDAAQCTATVLMQELGADG
HGDATQRTTILQSQELTADDGQGDTAQFTPTLQRQELTADDEQGDAVPCTSTLQRQQLNA
DDGQDDVAVCTTTLPWQKCISDGTQDDVDCCTTALLRQKSISDGAQGDVACCATALQRQE
PDTAHGKGNAAQPTTLHRQEFPVVGDSMQKTLQFRNSEDATTSLSRTQEGSHRVTEFLNT
SQAPTEEPFPRQFWKAGEDRLATQAAINNGQNRLRIHPKFLHSNATSHKWAFGAIAELLD
NAIDEMNNGATFVKIDKKKHSPNGDYSLVIEDNGGGMSPESLRHCMSFGFSQKCTTSSIG
RYGNGFKTSTMRLGADAIVFTCAKDHRRLTRSIGLLSYTFLMSTRCNDIFVPAVDYEFDA
SSSTFKRIMTCGEKHFSSNLSTLLRWSPFSTEGELLNQFSDMGCHGTKIIVFNLWLNDAL
EMELDFMTDDQDIIISGAPELRAGHNKLEQMHVANRLRYSLRVYASILYLHVPESFQIIL
CGRAVEPHCAVNDLIYRECIKYQPQVDVTTEVDVITTIGYLNGAPQLDIYGFNVYHKNRL
ILPYWRAGSYNAKRRGIAGVLEADFIRPTHDKQDFERTGLFQRLETRLKDMATEYWTYHC
HLVGYTQIAKKPPPAHYISTTADNDDHNLVSQAATNTCKYNSRTRASVALHPCSSGYSMQ
YPLHVGLDALTDQMDYACPSTSINVGTTSYISQNAPQQSQTELRKRRKSCSEIFWRAQKR
RNTNVYSDEPGSDNGTEEAEEGFRVVLDQNTMLKAQCSELKAAGKQLTSKAEKLRKELAV
WRRVYKNLTDELHLYNVLQGFRHGGHDSNPGIGFI
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgatagtggactttgttgatctatccagtgatgatgatgatgatgccagagaagaacac
agtgttattggaaaaggtcattcagttcatgtgaaggcagattttgttgacttgactagg
gatgaggacatctttgaaggagagcatcttgcttatggacaaggtgatgctgctcgggtc
acatcatttcttaaacagcagttcttcgctgatgatgtacaagctgaagctgcccagtgc
acagtaacgctacagacgcaagaacttatagcagatgatgggcaaggtgatgctgcccag
tgcacagcaacattacagatgcaagaacatacagaagatgatggacaaggtgatgcttcc
cagagcatagccatattaaagatgcaagaacttagagcagatcatgaacaaggcgatgct
gtccagtacacagcagcattacagttgcaagaacttagaacagatgatgaacgaggtgat
gctgcccattgcgcaacaacattacagaggcaagaacttactgcagaagttggacatggt
gatgctacccagtgcatagcaacattacagatgcaaaaacaacttatagctgatgatgta
caaggtgatgcttcccagtgcgcaacattacagatgcaagaacttactgcaggtgttgga
caaagtgatgctgcccaatgcacagcaacagtactaatgcaagaacttggcgcagatgga
catggtgatgctacccagcgcactacaattttgcagagtcaagaacttactgcagatgat
ggacaaggtgatactgctcaattcacaccaacattacagaggcaagaacttactgcagat
gatgaacaaggtgatgctgtcccgtgcacatcaacactacaaaggcaacaacttaatgca
gatgatggacaagatgatgttgccgtgtgtacaacaacattaccatggcaaaaatgtatt
tcagatggcacacaagatgatgtggattgctgcacaacagcattactgaggcagaaatct
atttcagatggcgcacaaggtgatgtggcttgctgcgcaacagcattacagaggcaggaa
cccgatactgctcatggaaaaggcaatgcagcccagcccacaacattacataggcaggag
tttccagtagtgggtgatagcatgcaaaagactttgcagttcagaaattcagaagatgct
actacatccttgtcgagaacacaagaagggagtcacagggtaactgaatttcttaatacc
tctcaagcaccgactgaagaaccatttcctcggcaattttggaaagctggagaggacaga
ttagctactcaagctgctatcaacaatggccaaaaccgcttacggattcatcccaagttt
cttcattctaatgctacttcgcataagtgggcatttggtgctattgcagagctgctcgac
aacgctattgatgagatgaacaatggggcaacctttgtcaaaatagataagaaaaagcat
tctcctaatggggattattcattggtgatagaagacaatggaggcggcatgagtccagaa
tctcttcgacattgtatgagctttggattctctcagaaatgcaccacttcatccattggg
cgatatggcaatggcttcaaaactagcacgatgaggcttggggcagatgctattgtattc
acatgtgcaaaagatcataggagattgacacgaagcatcggattgctgtcttacacattc
cttatgagcactaggtgcaatgacatatttgtacctgcggttgactatgaatttgatgcc
tcatcttcaactttcaagaggataatgacatgtggtgaaaaacatttttcatctaatctt
tccactcttttgaggtggtctccattttctacagaaggtgaattattgaatcaattcagc
gatatggggtgccatggcacaaaaatcattgtatttaacttgtggttgaacgatgcactg
gaaatggagcttgactttatgactgatgatcaggatattataatctcaggagcacctgag
ctacgagcaggacataataaattagaacagatgcatgtagcaaaccgtcttcgatattct
ctccgggtttatgcatccatactatacctacatgtacctgaaagctttcaaatcatcctg
tgtggacgagctgttgaaccacattgtgctgtcaatgatctcatataccgtgaatgtatc
aaatatcaaccacaagttgatgtaaccacggaggttgatgtcattactacaattggctac
ttaaatggtgctccacaacttgatatctatggatttaatgtctaccataagaaccgtctg
atactgccctattggcgtgcaggctcatataacgcaaagagaagaggcattgctggggtt
ttggaggcagacttcataagacctacacatgataagcaagattttgagaggacaggactt
ttccagaggcttgagacacgattaaaagacatggcaacggagtattggacttaccattgc
catctggttggttacactcagattgcaaaaaagcctcctccagcacattatatatcaact
actgctgacaatgatgatcataacttagtatctcaagctgccacaaatacttgcaaatac
aattcaagaaccagggcatctgtagcattgcacccttgttccagtggatatagcatgcaa
tatcctttgcatgttggtcttgatgccttgacggatcaaatggactatgcatgcccttct
acgagcataaatgtggggactacatcatatatatcacaaaatgcacctcaacaatctcaa
actgaattacgcaaacgaagaaagtcttgctccgagattttctggagagctcaaaaaagg
cggaacacgaatgtttattctgatgaacctggaagtgataatggcactgaggaggcagag
gaagggttcagagttgtactcgatcagaacaccatgctaaaggctcagtgctctgaactc
aaggcggcaggaaagcagttgacatctaaggcagagaaattgagaaaggaacttgccgtg
tggcgacgggtgtacaagaacctaaccgacgaattgcatctctacaatgtccttcaagga
ttccgtcacggtgggcacgacagcaaccccggcattggattcatataa
DBGET
integrated database retrieval system
