Panicum virgatum (switchgrass): 120703483
Help
Entry
120703483 CDS
T07260
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120703483
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
120703483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
Motif
Other DBs
NCBI-GeneID:
120703483
NCBI-ProteinID:
XP_039843521
LinkDB
All DBs
Position
4K:22785368..22790772
Genome browser
AA seq
664 aa
AA seq
DB search
MDRSRSKRGYHYDQDSPPPRSKQRFDRRSGGGQNPNSGYHRRGPPGGGGGGSDRRGFLPP
DAAPPPPPPPPPPPSAAAGAPGAASTTTSFRILCPECKAYGFPPGFVAKVRDDSGALVIV
HPPIAGDYVRIIETVDGARREADGRPPMYSPAQEALLMVHRRILETEAEDGDEDGEYGPR
GKDPRDRGKTTTRLIVPKLHVGCLLGKGGKIIEQMRMETKTHIRILPRDQQTPRCVSSSE
EVVQVVGDGNCVRKAVAIITDRLKESLHRDRGPFRGRMNSPEPRISQEDEYLGGVQQMPV
YEETYGRPDQIRNNISLEPPGYEFDSNGGKVIEHPDILYDDIVFRILCPNDKASSLVSTR
DGIIEMLQADVGVDVRLTDIIAGSDERVVIITSREGPDHELFPAQEALLHIQTHIVDLGP
DKDNIITTRLLVPSSEIACFDGREGSLSDIQRQTSANVQILPREDLPSCALDSDELIQIV
GDIRASRNALMQVTTKLRSYLYREMSGPIQIGNINVHGAISPATGSPRGPYQGNDIPMGP
YHQAPQLTASWHSKDSGGSASGSFEQGTNINDDIRQNASKRFAIPLVTRSTLEVVIPNSA
VASLTMRAGSKLAQISEMSGATVTLADDRPGILEKVVQISGTPEQTEKAKSLLQGFILSI
QDDS
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggatcgttcccgctccaagcgcggctaccactacgaccaggactcgccgccgccccgc
tccaagcagcgcttcgaccgccgcagcggcggcggccagaaccctaactccggctaccac
cgccgcgggccacccggaggcggaggcggcggctccgaccgccgcggcttccttccccct
gatgccgcgccgcctccgcccccgcccccgcctcccccaccgtcggccgctgcgggggcg
ccgggcgccgcgtccaccaccacctccttccgcatcctgtgccccgaatgcaaggcctac
ggcttcccgcctggcttcgtcgccaaggtccgggacgacagcggcgcgctcgtcatcgtg
cacccgcccatcgcaggcgactacgtccggatcatcgagacggttgacggcgcgcggcgc
gaggccgacggccgcccgcccatgtactctccggcgcaggaggcgctccttatggtgcac
cgccggatcctcgagacggaagccgaggatggcgacgaggatggcgaatacgggcccagg
gggaaggacccgcgggacagggggaagaccaccacgcgcctcatcgtacccaaacttcac
gttggatgcctgctcggcaagggtggcaagatcatcgagcaaatgaggatggagaccaag
acgcacatcaggattctgccgcgcgaccagcagacgccgcgctgtgtgtcctcgtccgag
gaggttgtacaggttgttggagatggaaattgtgttaggaaggctgtagcaataatcact
gatcgcctaaaggaaagcttacaccgcgatcgtggtcctttccgagggcgaatgaattct
ccagagcctcgaatttctcaggaagatgaatacctgggtggtgttcagcagatgcctgta
tatgaagaaacttacggacgacctgatcagattaggaacaatattagcttggagccacca
gggtatgagtttgattcaaatggtggcaaggtcattgaacacccagatattctgtatgat
gatatcgtatttcgaattctttgcccaaatgacaaggctagcagtttagtttcgacgcgt
gatggaataatagagatgctacaggcagatgttggtgttgatgttaggcttactgatatt
attgctggttctgatgaaagggtagtaatcatcacatccagagagggcccagaccatgag
cttttcccagcccaggaagcactgctgcacatccaaactcatattgtagaccttggccct
gataaggataacattatcacgacaagactacttgtaccttcaagtgaaattgcttgcttt
gatggaagggaggggtcattatctgatatacagagacagactagtgcaaatgtgcagata
ttaccaagagaagatcttccatcatgcgccctagattctgatgaactcatacagattgtt
ggagatattagagcttctcggaatgctcttatgcaagtaaccacaaaactaaggagttat
ctataccgtgagatgtctggtcctattcaaattggtaacattaatgtacatggagccatt
tctccggcaactggctcacctcgaggaccataccagggaaatgatattccaatgggtcct
taccaccaagcaccacaactgacagcttcatggcactcaaaggatagtggaggcagtgca
agtggatcatttgagcaaggtaccaacattaatgatgatatcaggcaaaatgcttcaaaa
agatttgccattcctctagtgactagaagcacgttagaagttgtcataccaaacagtgct
gttgcaagcctcaccatgagggctggtagcaagcttgcccaaataagcgagatgtctggt
gctactgtgactctcgctgatgatagacctggcatcttggagaaagttgtacaaatatct
ggtacccctgagcagactgaaaaagctaaaagtttgctgcagggatttattcttagcatc
caagatgacagttga
DBGET
integrated database retrieval system
