Panicum virgatum (switchgrass): 120703497
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Entry
120703497 CDS
T07260
Name
(RefSeq) probable sodium/metabolite cotransporter BASS4, chloroplastic
KO
K14347
solute carrier family 10 (sodium/bile acid cotransporter), member 7
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120703497
04147 Exosome [BR:
pvir04147
]
120703497
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC10: Sodium bile salt cotransporter
120703497
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
120703497
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Gene cluster
GFIT
Motif
Pfam:
SBF_like
SBF
Ldr_toxin
Motif
Other DBs
NCBI-GeneID:
120703497
NCBI-ProteinID:
XP_039843542
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Position
1K:33773339..33788216
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AA seq
441 aa
AA seq
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MDQAVWSELLPFPIPTRWPRAPASPSASAFAMITHHPSLLRPPILTRRVGVLGRRPALHA
FLSAAVASARPCTPPLRLRPVRAAASQVGGDGGKGAVPPRALGAALLDFASSNFLPLALV
GGVILGLLDPNLGCLAHKYSLSKYSTFGIFVISGLTLRTKELGAALEAWPAGLYGLASIL
LFTPFLAQFIMRLQLFPREFITGLAMFCCMPTTLSSGVTLTQLVGANSALALTITVVSNL
LGIIFVPLSLAMYIGAGAGVSLPTEQLFRSLVTRLLIPLIIGKVAREASKGIADFVDGNR
QGFSVASAVLLSLVPWIQVSRSRSLILSVQVKAFAAAIAIGVLLHLALFAFNAVMLQILS
RLEQKGDSVFAKKEYARAVILVASQKTLPVLVAVVDQLGGAFGESGFLVIPGVAAHINQI
IIDSMIVNWWRKRDQQFTTAN
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagccgtttggtcggagctccttccattcccgatccccactcggtggccacgc
gcgccggcttctccctccgcctccgccttcgcgatgataacccaccatccctccctgctc
cgtccgcccatcctgacccgccgcgtcggggtactcggccggcgtccagcactccacgcc
ttcctgtccgccgccgtcgcctcggctcgcccttgtacgccgcccctccgcctgcggcct
gtgcgcgccgccgcctcgcaggttggtggtgatggaggcaaaggcgcggtgccgcctcga
gcgctgggggccgcgctgctcgacttcgcgagtagcaacttcctcccccttgctcttgtt
ggtggggtcatattgggtctcctagatcctaatcttggatgccttgctcacaaatactcc
ttgtcgaagtacagcacttttgggatatttgtgatctcaggactgaccctacgaaccaag
gagcttggtgcagcattagaagcttggcctgctggactatatggactagcctctattttg
ctgtttacaccctttcttgctcagtttattatgcgacttcagctctttcctcgtgaattt
atcactgggttagcaatgttttgctgcatgccaacaacattatcaagtggagtcacacta
acacagcttgttggcgctaactctgcacttgctcttacaataacagttgtatccaattta
cttggcattatctttgtacctctttctctagcaatgtacattggcgctggagctggggtg
tctctgcctactgagcaactattcagaagtctggtcacccgccttctaatccctctgatt
atagggaaggttgctcgagaagcctcaaaaggtattgctgattttgttgatggaaatcga
caaggtttttcagttgcaagtgctgttcttctcagcctagtcccatggattcaagttagt
agatcaagatcactaatcttatctgttcaagtaaaagcttttgctgctgctattgctatt
ggagtgcttctacatcttgctctgtttgctttcaatgccgtgatgttgcagatcttgtca
cgtcttgaacagaaaggggattcagtctttgctaaaaaagagtacgcacgagctgtcatt
ttggtggccagtcagaaaacattgcccgtgttggttgctgtggttgatcagcttggagga
gcctttggggagtctggatttctggtcatccctggcgtcgctgcacacattaaccagatc
attatcgattctatgatagtaaattggtggcgcaagagggatcaacaatttactactgcg
aactaa
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