Panicum virgatum (switchgrass): 120703525
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Entry
120703525 CDS
T07260
Name
(RefSeq) ABC transporter G family member 8-like
KO
K05681
ATP-binding cassette, subfamily G (WHITE), member 2
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir02010
ABC transporters
pvir04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120703525
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
120703525
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120703525
04147 Exosome [BR:
pvir04147
]
120703525
04090 CD molecules [BR:
pvir04090
]
120703525
Transporters [BR:
pvir02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
120703525
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of breast milk
120703525
CD molecules [BR:
pvir04090
]
Proteins
120703525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
AAA_21
ABC2_membrane_7
AAA_29
AAA_25
PDR_assoc
Rad17
AAA_22
RsgA_GTPase
AAA_16
SMC_N
nSTAND_NTPase5
AAA_30
nSTAND1
AAA_28
AAA_18
SRP54
AAA_33
Cytidylate_kin
AAA_23
Motif
Other DBs
NCBI-GeneID:
120703525
NCBI-ProteinID:
XP_039843570
LinkDB
All DBs
Position
4K:24015367..24017561
Genome browser
AA seq
615 aa
AA seq
DB search
MLLHSATMATTTTTVTEPDNADPSPSSPPPKKVAYELAARNIYYAKPAPAPRSLARLVAR
PCGAAPAPPDYILRDVSLTAKAGEILAVVGPSGAGKSTLLDILAARTAPTHGRLLLNSAP
LRPSSFRRLSAHVQQADVALTLLTVSETFAFAASLLRPKSAAAAVAALLTDLRLAHVAHT
RVSPARLSGGERRRVSIGLALLRDPGVLLLDEPTSGLDSSSAHVVVSCLRSVAAARGTTV
VLTIHQPSARLLSAVDSLLLLSRGAVLHHGSLASLDAALLSHGLVVPAQLNPLEFALEVL
DQLPHPSPSTQELLTSPPSDHRKAATSSTAASPSSRLHELVVLYKRAWKVVFRSKQLLLT
NFLEAVLVGTLLGTIYIHAGYGEAGAHKRLGLFAFTLTFLLTSTTETLPTFVSERPIVLA
ETAAGLYRLSSHAAAATLVFLPYLLAVALLYSACVYFLVGLCASAGAFAAFVLVVWAVVL
AANSLVLFVSSFAPDYIAGTSLLSVSLAGFFLFSGYFLPRGSMPAYWVFMHYASPYKYAL
DALLANEYSCAADRCFSVGGGGAGECSETGRDVLAEKGLTAAERWTGVQVLFGFFLLYRV
LYWVVLSRRASRAKR
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgctccttcactccgccacaatggccaccaccaccaccaccgtcacggaaccggacaat
gcggacccgtccccgtcgtctccaccgcccaagaaggtcgcctacgagctcgccgcccgg
aacatctactacgccaagccggcgccggcgccgaggtcgctcgcgcggctcgtcgcccgg
ccgtgcggcgcggccccggcgccgccggactacatcctccgcgacgtgtcactcacggcg
aaggccggggagatcctggccgtcgtggggcccagcggcgccggcaagtccacgctgctc
gacatcctcgccgcgcgcaccgcgcccacgcacgggaggctgctgctcaactccgcgccg
ctccggccgtcgtccttccgccggctctcggcgcacgtgcagcaggcggacgtcgcgctc
acgctgctcaccgtctccgagaccttcgccttcgccgcgtcgctgctgcgcccgaagtcg
gcggcggccgcggtcgccgcgctcctcaccgacctccggctggcgcacgtcgcgcacacg
cgggtctcccccgcgcgcctgtccggcggggagcggcggcgcgtgtccatcgggctcgcc
ctcctgcgcgaccccggcgtgctcctcctggacgagccgacctccggcctcgactcctcg
tcggcgcacgtggtggtcagctgcctccgctccgtcgcggccgcccggggcacgacggtg
gtgctcaccatccaccagccgagcgcgcgcctcctctccgcggtggactcgctcctcctc
ctctcgcgcggcgccgtcctgcaccacggctccctcgcctccctcgacgccgccctcctc
tcccacggcctcgtcgtcccggcgcagctcaaccctctcgagttcgccctggaggtcctc
gaccagctcccccatccttcgccgtcgacccaggagctcctcacttcgccgccgtcggat
catcgcaaggcggcgacgtcgtcgactgctgcctcgccgtcgtcgaggctgcacgagcta
gtggtgctgtacaagcgggcgtggaaggtggtgttccgcagcaagcagctgctgctgacc
aacttcctggaggcagtgctcgtgggcacgctgctggggaccatctacatccacgccggc
tacggcgaggccggcgcgcacaagcggctgggcctgttcgccttcacgctgaccttcctg
ctgacctcgacaacggagacgctgccaacgttcgtgtcggagcggccgatcgtgctggcg
gagacggcggcggggctgtaccggctgtcgtcgcacgcggcggcggcgacgctggtgttc
ctcccgtacctcctggcggtggcgctgctctactcggcgtgcgtctacttcctggtgggg
ctgtgcgcgtcggcgggcgcgttcgcggcgttcgtgctggtggtgtgggcggtggtgctg
gcggccaactcgttggtgctgttcgtgagctcgttcgcgccggactacatcgcggggacg
tcgctgttgtcggtgtcgctggcggggttcttcctcttctccggctacttcctgccgcgc
ggtagcatgccggcgtactgggtgttcatgcactacgcgtcgccgtacaagtacgcgctg
gacgcgctgctggcgaacgagtactcgtgcgcggcggaccggtgcttcagcgtcgggggc
ggcggcgccggcgagtgctcggagacggggcgcgacgtgctggcggagaaggggctcacg
gcggcggagcggtggaccggcgtgcaggtgctgttcggcttcttcctcctctaccgggtg
ctctactgggtggtgctcagccggcgagcgtccagggccaagagatga
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