Panicum virgatum (switchgrass): 120703570
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Entry
120703570 CDS
T07260
Name
(RefSeq) RING-H2 finger protein ATL32-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120703570
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120703570
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
120703570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-RING_16
zf-C3HC4_3
zinc_ribbon_16
Prok-RING_1
zf-Nse
FANCL_C
Motif
Other DBs
NCBI-GeneID:
120703570
NCBI-ProteinID:
XP_039843623
LinkDB
All DBs
Position
4K:26881687..26883566
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AA seq
448 aa
AA seq
DB search
MHLRAPHASDCVQEAHPAPARPAPTHHRRQMPTPRHHAPPLAALTLLLMLLAGPAAAQPP
SRDRDNGGGGYGMPNQPTGFSTPMVVLLVALIAAFFFIGFFSVYIRRCGRGASASGGPAI
PAAALLALSRQEQRDQQQQQRGLDPAVLASFPTMRYAEAKELRVGGKDAALECAVCLSEF
AGGEELRLLPPCSHAFHTDCIGEWLAGHVTCPVCRCNLDPDQELAAAEDEVVAEQEAADQ
VAIGVAREGAEDEEETRREEAMELERIGSQRRAVRSRSGRLVPRSHSTGHSLATRLDGDL
ERFTLRLPEHVRREMVAAGEESLRRTGPRRAGARSARLGRSDRWPSFITRTFSSRVPFWS
ASRRAAPGAEAAVAAAAGTEASAATARTKREKTATAADGGAVTPPKGSVRFDCLGGGGAA
VSGARVGAAAGDSETEDDDEEKAIARHA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgcgcgccccgcacgccagcgactgcgtccaagaagcgcaccccgcccccgcc
cgcccagcgcccacccaccaccgccgccagatgccgacacctcgccaccatgcgccgccg
ctcgccgcgctcactctgctgctgatgctgctcgccgggcccgccgcggcgcagccgccg
tcgcgggacagggacaacggcggcggcgggtacggcatgccgaaccagccgacgggcttc
agcacgcccatggtcgtgctcctggtggcgctcatcgcggccttcttcttcatcggcttc
ttctccgtgtacatccgccggtgcgggcggggcgcctccgcctcgggcgggccggccatc
ccggccgccgcgctgctcgcgctgtcgcggcaggagcagcgggaccagcagcagcagcag
cgcgggctcgaccccgccgtgctcgcgtcgttcccgacgatgaggtacgcggaggccaag
gagctccgggtgggcggcaaggacgccgcgctcgagtgcgccgtctgcctcagcgagttc
gccggcggcgaggagctccggctgctgcccccgtgcagccacgccttccacacggactgc
atcggggagtggctcgccggccacgtcacctgccccgtctgccgctgcaacctcgacccc
gaccaggagctcgccgcggccgaggacgaggtggtcgcggagcaggaggccgcggatcag
gtggccatcggcgtggcccgcgagggcgccgaggacgaggaggagacgaggagggaggag
gccatggagctggagcggatcgggagccagcgccgcgcggtgcggtcgcggtcggggcgg
ctcgtcccgcggtcgcactccacgggccactccctcgcgacgcgcctcgacggcgacctc
gagcggttcacgctgcggctgccggagcacgtgcgcagggagatggtcgccgcgggcgag
gagagcctgcgccgaacggggccccgccgcgccggcgcccggagcgcgcggctcgggcgg
tcggaccggtggccgtcgttcatcacgcggacgttctcgtcgagggtcccgttctggtcc
gcttcgcggagggcggcgcccggcgcggaggcggccgtggcagcagcggcggggacggag
gcgtccgcggcgacggcgaggaccaagcgcgagaagacggccaccgcggcggacggcggc
gccgtgaccccgcccaaggggagcgtccgcttcgactgcctcggcggcggcggcgccgcc
gtctcgggcgcgagggtcggcgccgcggccggcgacagcgagaccgaggacgacgacgag
gagaaggccatcgcccggcacgcctga
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