Panicum virgatum (switchgrass): 120703671
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Entry
120703671 CDS
T07260
Name
(RefSeq) acyl-coenzyme A oxidase 3, peroxisomal-like
KO
K00232
acyl-CoA oxidase [EC:
1.3.3.6
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00071
Fatty acid degradation
pvir00410
beta-Alanine metabolism
pvir00592
alpha-Linolenic acid metabolism
pvir00640
Propanoate metabolism
pvir01040
Biosynthesis of unsaturated fatty acids
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
pvir01212
Fatty acid metabolism
pvir04146
Peroxisome
Module
pvir_M00087
beta-Oxidation
pvir_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
120703671
09103 Lipid metabolism
00071 Fatty acid degradation
120703671
00592 alpha-Linolenic acid metabolism
120703671
01040 Biosynthesis of unsaturated fatty acids
120703671
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
120703671
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120703671
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.3 With oxygen as acceptor
1.3.3.6 acyl-CoA oxidase
120703671
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Motif
Pfam:
ACOX_C_alpha1
ACOX
Acyl-CoA_dh_M
Acyl-CoA_dh_1
Acyl-CoA_ox_N
Motif
Other DBs
NCBI-GeneID:
120703671
NCBI-ProteinID:
XP_039843755
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All DBs
Position
4K:complement(32028834..32035154)
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AA seq
684 aa
AA seq
DB search
MDPAGRRAAAIARHLAAGALPVPPPLAAAAALLGPSPCLSYAPPESAENAPAFPPTELRA
LLDGHHLMERDWVFRVMEESQLFCPLQRGGGSRVFVAPDYNDGKEAQREATMRRIAHLAQ
RGVFRGWLTEPGAEVELRKLALLECLGVYDHSLAIKIGVHFFLWGSAIKFLGTKRHHDKW
LLATENYDVKGCFAMTELGHGSNVRGIETIATYDSKAREFIINTPCESAQKYWIGGAANH
ATHTIVFSQLHINGKSEGVHAFVAQIRDEDGNVLPDIHIADCGHKIGLNGVDNGRIWFQN
IRVPRENLLNFVADVLPNGQYVSVIDDPDQRFAAFLSPLTLGRVNIAVNSVYISKVGLAI
AVRYGLSRRAFSLTPDDPEMLLLDYPSHQRRLLPLLAKVCLMSSAGNFMKKMYVKRTPEM
SKAIHIYSSALKATLTWQNMITLQECREACGGQGLKTENRIGIFKAEFDVQSTFEGDNNV
LMQQVSKALYAEFLAAQKKKKPFKGLGLEHLNGQNPVIPDKLTSSILRSSKFQMDLYCLR
ERDLLKQFTEEVSLHLAQGKSREKALMLSYQLAEDLARAFTERTILQIFLADEMNVPSGS
LKEVLLLLRSLYVMVSIDESVSFLRYGYLSRDNVASVRNEVLKLCSELKPHALAVVSSFG
IPDAFLSPLAFDWIEANALSTGSH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggaccccgccggccggcgcgcggccgccatcgcgcggcacctcgccgccggcgcgctc
cccgttccaccgcccctcgctgccgcggccgcgctgctgggcccctccccttgcctcagc
tacgcgccgccggagtcggccgagaacgcgccggctttcccgcccacagagctccgtgcg
ctacttgacgggcaccatctcatggagcgcgactgggtgtttcgcgtcatggaggagagc
cagctattttgcccgcttcagcgtggcggcgggagtagggtcttcgtggcgccggactac
aacgacgggaaggaggcgcagcgggaggccacgatgcggcgcatcgcgcacctggcgcag
cgaggtgtgttccgtgggtggctcaccgagcccggagccgaggttgagctccgcaagctc
gcgctgctcgagtgcctaggtgtctacgaccactccctcgccatcaagatcggcgtccac
ttctttctctggggcagtgctatcaagtttcttggaacaaagcgccaccatgacaagtgg
ttgttggccacagaaaattatgatgtcaagggttgttttgcaatgacagaactaggccat
ggaagcaatgtgcgaggaatagagacaatagcaacttatgattcaaaagcaagagagttt
atcataaatactccatgtgaatctgctcagaagtactggattggtggagctgctaaccat
gcgacgcatacaatagtcttttctcaactccatataaatgggaaaagtgaaggagtccat
gcttttgtggctcaaattagggatgaagatggaaatgtattgcctgatatccatatagct
gactgtggccataagattggattgaatggtgttgataatggccggatttggtttcagaat
atacgtgttcctcgcgagaacttgcttaattttgttgctgatgttttgccaaatgggcaa
tatgttagcgtgatagatgatccggatcagaggtttgcagctttcctttctccacttaca
cttggtcgagtaaatattgcagttaactcagtctacatttcaaaggtaggcttagcaatt
gctgtgagatacggtttgtcgaggagggccttttcattaacaccagatgatcctgaaatg
ttgttgcttgattatcccagtcaccagcgacgccttctaccactgctagcaaaagtatgt
ctgatgagcagtgctggtaattttatgaaaaagatgtatgtcaagagaactcctgaaatg
agcaaagccatacacatttattctagtgccctgaaggccacactaacttggcagaatatg
attacacttcaggagtgtcgtgaagcctgtggaggccaaggtctaaagactgagaaccgc
ataggaattttcaaagctgaatttgatgtccagtccacatttgagggtgataataatgtt
ctaatgcagcaggtaagcaaagcactttatgctgaatttttggctgcacaaaagaagaag
aagccattcaagggattgggattggaacacttaaatggtcagaaccctgttattcctgat
aagctgacaagtagcatattaaggagctccaagttccagatggacctgtactgcttaagg
gagagagatttactaaagcagttcacggaggaggtttctctccatctcgcacaaggaaaa
agcagagaaaaggctttgatgctgagctaccaacttgctgaagatttagctagagctttt
actgagcgtacaatcctccaaatatttttggcagacgagatgaatgttccttctggttcc
ctaaaggaggtgctgctcttgctgaggtctctgtatgttatggtcagcatagatgaatct
gtgtctttcttaagatatggatatttgtcacgtgacaacgtagccagtgtgcggaatgaa
gtcctgaaactgtgcagtgaactcaagccccatgcgcttgctgttgtcagttcttttgga
atccctgatgcattccttagtccacttgcttttgactggattgaggcaaatgctctgtca
actgggagccactaa
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