Panicum virgatum (switchgrass): 120703829
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Entry
120703829 CDS
T07260
Name
(RefSeq) serine-threonine kinase receptor-associated protein-like
KO
K13137
serine-threonine kinase receptor-associated protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120703829
Spliceosome [BR:
pvir03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
120703829
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EIF3I
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_EML
WD40_RFWD3
NBCH_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_NWD2_C
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_Vps41
eIF2A
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
WD40_like
Beta-prop_IP5PC_F
DUF7586
FlaF_Ig-like
Motif
Other DBs
NCBI-GeneID:
120703829
NCBI-ProteinID:
XP_039843952
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All DBs
Position
4K:complement(37571564..37578186)
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AA seq
338 aa
AA seq
DB search
MEKKKVAIPLVCHGHSRPVVDLFYSPVTPDGYFLISASKDTNPMLRNGETGDWIGTFQGH
KGAVWSCCLDRNALRAASASADFSAKVWDALTGDELHSFEHKHIVRACAFSEDTHLLLTG
GMEKTLRVYDMNRPDAAPRELDKSPGSVRTVAWLHSDQTILSSCTDMGGVRLWDVRTGKI
VQTLETKASVTSAEVSQDGRFITTADGSSVKFWDANHFGLVKSYDMPCNVESASLEPKSG
SKFVAGGEDLWVHVFDFFTGEEITCNKGHHGPVHCVRFAPGGESYASGSEDGTIRIWQLS
PPNADDSEAANGKATAGVNEVTTKIEGFHIPKEGQTEG
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaagaaggtggcgatcccgctcgtgtgccacggccactcgcggcccgtggtg
gacctcttctacagccccgtcacgcccgacggctacttcctcatcagcgccagcaaggat
acaaacccaatgcttcgtaatggtgagaccggtgactggattgggacatttcaaggtcat
aaaggagctgtttggagctgttgtcttgacagaaatgctctgcgtgctgcatctgcatct
gctgacttctcagctaaagtatgggatgcactgactggtgatgagctacattcatttgaa
cacaagcatatagtacgggcctgtgccttttctgaggatacccacctgttactcactgga
ggcatggagaagactttgcgtgtgtatgacatgaaccgccctgatgcagctccaagagag
cttgacaaatcacctggttctgtccgaactgttgcttggcttcatagtgaccaaactata
ttgagttcctgcactgatatgggtggagtaaggttatgggatgtgagaactggaaaaatt
gtccaaactcttgaaaccaaggcttctgtcactagtgcagaagtaagccaggatggcagg
ttcatcactacagctgatggctcaagtgtaaaattttgggatgcaaatcactttggtctt
gttaaaagctatgatatgccctgcaatgtggagtcagcttcacttgaaccaaagtctggg
agtaaatttgtcgctggaggagaagatttgtgggttcatgtatttgatttcttcactggt
gaagaaataacttgtaacaaagggcatcacggtccagtccactgcgtccggttcgcacct
ggtggtgaatcatatgcatcagggtcagaagatggcaccatccggatctggcagcttagc
ccccctaatgctgatgacagtgaggcggccaatggcaaggcaactgctggggtgaatgag
gttacaaccaagatcgaaggcttccacatccccaaggaggggcagaccgaggggtag
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integrated database retrieval system
