KEGG   Panicum virgatum (switchgrass): 120703829
Entry
120703829         CDS       T07260                                 
Name
(RefSeq) serine-threonine kinase receptor-associated protein-like
  KO
K13137  serine-threonine kinase receptor-associated protein
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pvir03041]
    120703829
Spliceosome [BR:pvir03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    120703829
SSDB
Motif
Pfam: Beta-prop_WDR3_1st EIF3I Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 WD40_Gbeta WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st DSE1_N Beta-prop_NOL10_N ANAPC4_WD40 Beta-prop_Aladin CFAP251_N Beta-prop_WDR41 Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st Beta-prop_EML WD40_RFWD3 NBCH_WD40 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_NWD2_C Beta-prop_DCAF4 PAC11 Beta-prop_EIPR1 Beta-prop_Vps41 Beta-prop_IFT140_1st ASA1 Beta-prop_VPS8 Beta-prop_ACSF4 eIF2A Beta-prop_WDR19_1st Beta-prop_RIG_1st WD40_like DUF7586 Beta-prop_At4g14310 FlaF_Ig-like
Other DBs
NCBI-GeneID: 120703829
NCBI-ProteinID: XP_039843952
LinkDB
Position
4K:complement(37571564..37578186)
AA seq 338 aa
MEKKKVAIPLVCHGHSRPVVDLFYSPVTPDGYFLISASKDTNPMLRNGETGDWIGTFQGH
KGAVWSCCLDRNALRAASASADFSAKVWDALTGDELHSFEHKHIVRACAFSEDTHLLLTG
GMEKTLRVYDMNRPDAAPRELDKSPGSVRTVAWLHSDQTILSSCTDMGGVRLWDVRTGKI
VQTLETKASVTSAEVSQDGRFITTADGSSVKFWDANHFGLVKSYDMPCNVESASLEPKSG
SKFVAGGEDLWVHVFDFFTGEEITCNKGHHGPVHCVRFAPGGESYASGSEDGTIRIWQLS
PPNADDSEAANGKATAGVNEVTTKIEGFHIPKEGQTEG
NT seq 1017 nt   +upstreamnt  +downstreamnt
atggagaagaagaaggtggcgatcccgctcgtgtgccacggccactcgcggcccgtggtg
gacctcttctacagccccgtcacgcccgacggctacttcctcatcagcgccagcaaggat
acaaacccaatgcttcgtaatggtgagaccggtgactggattgggacatttcaaggtcat
aaaggagctgtttggagctgttgtcttgacagaaatgctctgcgtgctgcatctgcatct
gctgacttctcagctaaagtatgggatgcactgactggtgatgagctacattcatttgaa
cacaagcatatagtacgggcctgtgccttttctgaggatacccacctgttactcactgga
ggcatggagaagactttgcgtgtgtatgacatgaaccgccctgatgcagctccaagagag
cttgacaaatcacctggttctgtccgaactgttgcttggcttcatagtgaccaaactata
ttgagttcctgcactgatatgggtggagtaaggttatgggatgtgagaactggaaaaatt
gtccaaactcttgaaaccaaggcttctgtcactagtgcagaagtaagccaggatggcagg
ttcatcactacagctgatggctcaagtgtaaaattttgggatgcaaatcactttggtctt
gttaaaagctatgatatgccctgcaatgtggagtcagcttcacttgaaccaaagtctggg
agtaaatttgtcgctggaggagaagatttgtgggttcatgtatttgatttcttcactggt
gaagaaataacttgtaacaaagggcatcacggtccagtccactgcgtccggttcgcacct
ggtggtgaatcatatgcatcagggtcagaagatggcaccatccggatctggcagcttagc
ccccctaatgctgatgacagtgaggcggccaatggcaaggcaactgctggggtgaatgag
gttacaaccaagatcgaaggcttccacatccccaaggaggggcagaccgaggggtag

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