Panicum virgatum (switchgrass): 120703831
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Entry
120703831 CDS
T07260
Name
(RefSeq) 26S proteasome regulatory subunit 8 homolog A-like
KO
K03066
26S proteasome regulatory subunit T6
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
120703831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pvir03051
]
120703831
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
120703831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_5
AAA_2
AAA_16
AAA_lid_PRS2_C
AAA_22
nSTAND3
PRS7_OB
RuvB_N
TIP49
AAA_28
AAA_14
AAA_33
NPHP3_N
ABC_tran
PhoH
IstB_IS21
Mg_chelatase
AAA_3
AAA_18
RNA_helicase
Parvo_NS1
AAA_17
RsgA_GTPase
AAA_25
AAA_24
AAA_19
TsaE
ATPase
DUF815
ORC-CDC6-like
AAA_7
DUF5320
NACHT
Motif
Other DBs
NCBI-GeneID:
120703831
NCBI-ProteinID:
XP_039843953
LinkDB
All DBs
Position
4K:37591174..37594845
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AA seq
423 aa
AA seq
DB search
MATVAMDVSQPSALPAAGAKAASAAAKKGSGVGEGLGRYYKHHIHDLRLAIPQRENDLGR
QKAQRNAINSQVKFCREELNLLQEPASHVGEVVKVMSTSKVLVKVHPEGKYVVDVDKSID
ITKLTPSTRVALRSGSYMLHVILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEV
IELPIKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYI
GEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMGSGGGGGDSEVQRTMLELLNQLDGF
ESTNKIKVLMATNRMDILDQALLRPGRIDRKIEFPNPSETSRVDILKIHSRRMNLMRDID
LKKIAVKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKKDTEKNMSLRK
LWK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggtggcgatggacgtctcgcagccctcggcgctgccggcggccggcgccaag
gcggcatcggcggcggcgaagaaggggagtggcgtgggagaggggctggggcggtactac
aagcatcacatccacgaccttcgcctcgcgatcccgcagagggaaaacgacctcggccgc
cagaaggcccagcgcaacgccatcaactcccaagttaagttttgccgggaagagttgaat
ctgcttcaagaaccggcttcacatgttggtgaggttgtgaaggtgatgagcacgtcaaag
gttctagtgaaggtgcatccagaaggcaaatatgtcgtagatgttgataaaagtatagat
attacgaagctcacgccttccacaagagttgctcttcgaagcggcagctatatgcttcat
gttatcctgcctagtaaagtagatccattagttaatcttatgaaggttgagaaggttccc
gattctacatatgatatgattggcggtcttgatcagcaaatcaaagagatcaaggaggta
atcgagcttccaattaagcatccagagttgttcgagagtcttgggattgcccaaccaaag
ggtgtcattctctatggccctccaggtactggaaaaactttacttgcacgtgcggttgct
catcacacagactgcaccttcattagggtgtcaggttctgagttggttcagaagtacatt
ggagagggttcccggatggttcgcgaactttttgtgatggctagggaacatgcaccatcc
attatatttatggacgaaatagactccattggatctgctaggatggggtcaggaggtggc
ggtggtgacagtgaggttcagcgaaccatgcttgagcttctgaaccaacttgatggtttt
gaatcaacaaacaagattaaggttcttatggcaacaaacaggatggacatattggatcaa
gccctcctgaggcctggtcgcattgacaggaagattgaatttccaaatccgagtgaaact
tctcgcgttgatattctgaaaatccactccagaaggatgaacttgatgcgtgacattgat
ctgaaaaagatcgctgtgaagatgaatggagcatcaggagcagagctgaaggctgtttgc
acagaagcgggaatgtttgcccttcgcgagagaagggtgcacgtcacccaggaggatttc
gagatggcagtggcgaaggtgatgaagaaggatacagagaagaacatgtccctgcggaaa
ctgtggaagtga
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