Panicum virgatum (switchgrass): 120703879
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Entry
120703879 CDS
T07260
Name
(RefSeq) 26S proteasome regulatory subunit 10B homolog A-like
KO
K03064
26S proteasome regulatory subunit T4
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
120703879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pvir03051
]
120703879
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
120703879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_16
AAA_2
RuvB_N
AAA_5
AAA_22
nSTAND3
DUF815
AAA_14
TIP49
AAA_7
Parvo_NS1
RNA_helicase
Prot_ATP_ID_OB_N
Mg_chelatase
AAA_18
AAA_3
NACHT
PRS7_OB
AAA_33
AAA_28
NPHP3_N
IstB_IS21
AAA_24
AAA_11
AAA_lid_PRS2_C
Sigma54_activat
TsaE
bpMoxR
ABC_tran
ATPase_2
ATPase
ResIII
DUF5906
PhoH
AAA_25
Motif
Other DBs
NCBI-GeneID:
120703879
NCBI-ProteinID:
XP_039844014
LinkDB
All DBs
Position
4K:38296687..38301306
Genome browser
AA seq
398 aa
AA seq
DB search
MAEGGEDARRRAAVAEYRKKLLSCRELEARAKTGRENQKNAKKDLEKTEEDLKALQSVGQ
IIGEVLRPLDKERFIGKASSGPRYVVACRSKVDKEKLIAGTRVVLDMTTLTIMRTLPREV
DPVVYNMLHEDPGNVSYSSVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP
PGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEI
DAIGGRRFSEGTSADREVQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPGRL
DRKIEIPLPNEQGRMEVLKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAI
RAERDYVIQEDFVKAVRKLNEAKKLESSAHYSADFGKE
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggccgagggcggggaggacgcgcgccgccgcgccgcagtcgccgagtaccgcaagaag
ctcctcagctgccgggagctcgaggcgcgggccaaaacagggagggagaaccaaaaaaat
gcaaagaaagacttggaaaaaactgaagaggatctcaaagcattgcaaagtgtgggccaa
attattggtgaggtccttcgacctttggacaaggaacgatttatcgggaaggccagcagt
ggaccacgctatgttgtcgcctgccgaagtaaagttgacaaagaaaagttgattgctggt
acaagagttgttcttgacatgacaacgcttactatcatgcgcactttgccacgcgaggtt
gaccctgtggtttacaacatgctacacgaagatcctggcaatgttagttactcatctgta
ggtggcttgtcggatcaaataagggaactcagagaatccattgagttaccgcttatgaat
ccggaactgtttctccgtgtagggattaagcctccaaagggtgtgctactctatggtcca
cctggaactgggaagacactcctagctagagccattgctagcaacatcgatgctaacttt
ttgaagatagtttcaagtgctatcattgacaaatatattggtgaaagtgcacgcttgatt
cgtgaaatgttcaactatgcacgtgagcatcagccatgcatcattttcatggatgaaatc
gatgccattggtggccgaagatttagcgagggcacaagtgctgatcgtgaggttcagagg
acattgatggagcttttaaatcagctagatggatttgatgagcttgggaaggtgaaaatg
atcatggcaacaaacagacctgacgttttggatcctgcgctccttcggcctgggcgattg
gacaggaagatcgagatcccactcccgaacgagcaggggaggatggaggtcctcaagatt
cacgcagctggcatcgccaagcatggcgaaatcgactacgaagctgttgtgaaactggct
gagggtttcaatggcgctgatctgcgcaatgtctgcacagaagctggcatggctgccatt
cgagcagagcgcgactatgttattcaggaggacttcgtgaaggcagtgcgcaagctgaac
gaggccaagaagctcgagtccagcgcgcactacagcgccgacttcggcaaggagtga
DBGET
integrated database retrieval system
