Panicum virgatum (switchgrass): 120703884
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Entry
120703884 CDS
T07260
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG2-like
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120703884
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120703884
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120703884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
zf-C3HC4_2
vWA-TerF-like
zf-C3HC4
zf-RING_2
zf-P11
TerY_C
Motif
Other DBs
NCBI-GeneID:
120703884
NCBI-ProteinID:
XP_039844020
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Position
4K:complement(38379622..38384415)
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AA seq
443 aa
AA seq
DB search
MGQKDSKPSYSYSYDYGNTSSGYTSRHAGNPTSSYSARYAPSSENNVQPETHARLQRKYS
RIGDDYRSLSQVTEALAQAGLESSNLIVGIDFTKSNEWTGKMSFNRRCLHDIGSTPNPYE
QAISIIGRTLSAFDEDNLIPCFGFGDASTHDQEVFSFYPENRPCNGFEEALERYREIVPT
LRLAGPTSFAPIIETAVGIVDSTGGQYHVLLIIADGQVTRSVDTQYGQLSPQERDTIDAI
VKASQFPLSIVLVGVGDGPWDMMHQFDDNIPARSFDNFQFVNFTEIMSKSIAAERKEAEF
ALSALMEIPEQYKATLDLQLLGRRHRITPRVALPPPTRNAYSRSTSFSQQSGVYSRSSSF
DQQTSGFQQRSESLKQQQPAATRRPDTYAAESALEDRLLCPICMYKSKDLAFGCGHQTCY
ECGKILERCPLCQQNITTRIRLY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggggcaaaaggactccaagccttcctatagctactcttatgattatggcaatacttca
tcggggtatacttccaggcatgctggaaatccaacatccagttatagcgcgaggtacgcc
ccttcttcagagaacaatgtgcagccagaaacacacgccaggttgcagaggaagtattca
aggattggtgatgactaccgctctttgagtcaggtgactgaagctttggcacaagcaggc
cttgaatcttcaaatcttattgtaggcattgatttcacaaagagcaatgaatggacaggt
aaaatgtccttcaatcgccgctgcctgcatgatattggaagcactccaaacccatatgaa
caagccatatctattattggaaggacactttcagcttttgatgaagataatttgattccc
tgctttggatttggtgatgcatcaactcatgatcaggaggtattcagcttttacccagag
aaccgtccatgcaacggttttgaagaggcgctagaaagatacagagaaattgttccaact
cttcgattagctgggcctacatcttttgctccgataattgagacagcagttggaattgtt
gacagcactggtggtcaataccatgttcttctgataattgctgatggacaggtaacccga
agtgttgatacacaatatggacaattaagtccgcaggagcgagatacaattgacgcaata
gtaaaagcaagccagttccctctgtcaattgttcttgtcggggttggtgatggaccatgg
gacatgatgcaccagtttgatgacaatatacctgctcgctcatttgacaatttccagttt
gtgaatttcacggagattatgtcaaagagcatagctgctgagagaaaggaggcagaattt
gcattgtcagcactgatggaaattcctgaacagtacaaagcaacacttgatcttcaactc
ttaggacgccgacacagaataactccaagagttgctctgccgccaccaacaaggaatgct
tattcgcggtcaactagcttcagtcagcaatctggtgtttattcacgatctagtagcttt
gaccaacaaacaagtggctttcagcaacgttccgagagcttgaaacagcagcaacctgcc
gccacaaggagacctgacacttatgcagcagaaagtgctttagaggacagactgctgtgc
cccatttgcatgtataaatcgaaggaccttgcatttggctgtggacatcagacttgctat
gaatgcgggaaaattttggagcgctgccctctatgccagcagaacataaccacaaggatc
aggctatactga
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