Panicum virgatum (switchgrass): 120703887
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Entry
120703887 CDS
T07260
Name
(RefSeq) mechanosensitive ion channel protein 2, chloroplastic-like isoform X1
KO
K22047
mechanosensitive ion channel protein 1/2/3
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120703887
Transporters [BR:
pvir02000
]
Other transporters
Pores ion channels [TC:
1
]
120703887
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GFIT
Motif
Pfam:
Msl2-3_C
MS_channel_2nd
MS_channel_3rd
Motif
Other DBs
NCBI-GeneID:
120703887
NCBI-ProteinID:
XP_039844025
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Position
4K:complement(38393103..38410266)
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AA seq
664 aa
AA seq
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MAVGLTSQVFLRLPASYIFCQRNKFRSHQMRSSLSLSSTSFPSIADRQDYWGHYALESNY
RLMPYIPNRYRSLGFRSFALPVPSQENPLIKSASLALTRSCDTLLANPATSLVLPAVGII
VFALWGFLPLMRDIRNRFDHGGNWKKSRTYLVSSSYLQPLLLWTGATLICRGLDPVVLPS
APSQAVKTRLITFVRSLSTVLAVAYILTSLIQQVQKFLVDMRNPNDTRNMGFDFITKALY
TGIWIAAVSLFMELLGFNTQKWITAGGFGTVLLTLAGREIFTNFLSSVMINATRPFVVNE
WINAKIDGVEISGIVEHVGWWSPTIIRGDDREAIYIPNHKFTVSIVRNNTRRTHWRIKTY
LAISHMDAGKIGIIVADMRKVLAKNPHIEQQKLHRRVFFEKIDPKNQALMIYISCFVKTS
HVEEYLNVQEAVMLDLLRIVGHHKARLATQIRTVQKSYGNADFDNIPFGEDMYSRTRGRP
LLIDTSARISDDKAKPRQVSSREDQKGRTNGSVQTKSASPENGNVSNSEKPEQKKMVTED
ARMKNSKSDNVTPVKPSSDAVTSTSKTGKGKAQEPEATERQEDGSVSVPNPKKESSPAFE
DNIVLGVALEGSKRTLPIEEGNPYPSHTETETDTVEASSSPKEKIAQRPKISGQEKTDQR
NVDR
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcggttggattgacatcccaggtgttcctaaggctgcctgcttcttacatattttgc
caaaggaacaaatttaggagccatcagatgaggagttctctttccttgtcatccacttcg
tttccttcaattgctgatcgacaagactattggggtcattatgcgttggagagtaactac
aggctcatgccttatattcctaatagatatagatctttgggctttaggtcttttgccttg
ccagttccttctcaggaaaatcctcttatcaagagcgcatcattagcactgactaggtca
tgtgatactttacttgcaaatcctgctacttcgcttgtgctccctgcagttggaattatt
gtgtttgctctatggggttttttgcctctaatgcgggatattagaaaccgttttgatcat
ggaggcaactggaagaagagccgtacttatttagtttcttcgtcctaccttcaacctcta
cttctctggacaggagcaacactaatctgcaggggtttggatccagttgtgttgccttca
gcaccaagccaagctgtgaaaacgcggctgataactttcgtgagatcattatcaactgtc
ctggctgttgcttatattctcacaagcttgattcagcaggtacaaaaatttctcgtggat
atgcgtaatcccaacgatacaagaaatatgggatttgattttatcacaaaagctctttat
actggtatttggattgctgctgtttctctctttatggaattgctgggtttcaatacccag
aagtggataactgctggaggttttggaacagtattgcttacacttgctggtcgtgagatt
ttcactaacttcctctcaagtgtaatgatcaatgccacacgaccatttgtagtcaatgaa
tggatcaatgcaaagatagatggtgttgaaatctctggcattgtcgagcatgttggttgg
tggtctccaacaattattagaggtgatgatcgagaagcgatatacattcctaaccataag
tttacagtatctatagtaaggaataacaccaggagaacccattggcgtattaagacctat
cttgctataagccacatggatgctggaaaaattgggattattgttgcagacatgaggaaa
gtgttggcaaaaaatccacacatagaacaacagaagctgcacaggagagtattttttgag
aaaattgatccaaaaaatcaagcacttatgatttacatatcctgttttgtgaagacatca
catgtcgaggagtatctcaatgtccaggaagctgttatgttggatcttcttagaatagtt
ggccatcacaaagcaaggcttgctacccaaattcgaacggttcagaaatcatatggcaat
gcagactttgataacattccttttggagaggacatgtatagtcgcacccgtggccgtcca
cttctgatcgatacatctgcaaggatcagtgatgacaaagccaaacctcgacaggtatcg
tcacgtgaggaccagaaagggaggacaaatggttcggtacagaccaaatccgcttcacct
gaaaatggtaatgtaagcaactctgaaaagccggaacagaaaaaaatggtaactgaagat
gctaggatgaagaacagcaagagtgataacgtgacaccagtaaaaccgtcttcagatgct
gttacttcaacttctaagactggtaaagggaaggcacaggaacctgaggccactgaacgt
caagaagatggttccgtgtcggtgccgaatccaaagaaagaatctagccctgcttttgaa
gacaacattgttctgggcgttgctcttgagggctccaagaggacgctgcctattgaagaa
ggaaacccttatccatcacacacagagactgagacggacaccgtagaggcttcttcatca
ccgaaggaaaagatagctcaaagaccgaaaatttcaggtcaggagaagactgaccagagg
aacgttgataggtga
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