Panicum virgatum (switchgrass): 120703935
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Entry
120703935 CDS
T07260
Name
(RefSeq) non-structural maintenance of chromosomes element 4 homolog A-like
KO
K22825
non-structural maintenance of chromosomes element 4
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvir03400
]
120703935
DNA repair and recombination proteins [BR:
pvir03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
120703935
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GFIT
Motif
Pfam:
Nse4_C
dsDNA_bind
Motif
Other DBs
NCBI-GeneID:
120703935
NCBI-ProteinID:
XP_039844080
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Position
4K:39070431..39074582
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AA seq
429 aa
AA seq
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MASLAMPEAGARARGEEAEPVTPPPQQQAEGSQAVDDRRLLRSQYLAVKSLISDEKDDMA
NADSEKFRSIISKVESLHEHVQRPREQIADAEALLDLAASLVTSVRSHSVMGITPSDFVA
GLLNKFGKLGGPDDEHASLDWAHLGRGASHIFMVAPGCATMVGPMKIEVNPRRVCIRKKR
TARPRGSSCPEQLADPTEKTKSDTDKNMSAIFNLLRRKKNAKLEHLVLNRISFAQTVENI
FALSFLVKDGRVEIKVNDEGHHIVYPRNAPAASAIASGKVIYNHFVFRFDFKDWKLMKGV
VPEREELMPHRSSQDAPGITASSHPEPELSQPTQSAPIRKRCRNRGLVLQDEIVATGARE
ITAGRTVATGAQQVVEDEVAAPTGPKEAMEDETGAGTSAREVMDNEMVAKYTKEIKLTYK
RRCLFQDQD
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggcttccctcgcaatgccggaggcgggagcgcgggcccgcggcgaggaggcagagccg
gtgacgccgccgccgcagcagcaggcggaggggtcccaggcggtggacgatcggcgtctg
ctgcggtcgcagtacctcgccgtgaagagcctcatcagcgatgagaaggatgatatggct
aacgcggactccgaaaagttccgctccatcatcagcaaggtggagagcctgcacgagcat
gttcagaggccaagggagcaaatagctgatgcagaagccctgctggaccttgctgccagt
ttggtaacatcagtaaggtcccattcagttatgggaattacgccttctgattttgttgct
ggactgctgaataagtttggaaagctaggggggcctgatgatgagcatgcctcgttggac
tgggctcatcttggacgtggcgcttctcatattttcatggttgctcctggatgtgccaca
atggttggccccatgaagatagaagtgaacccacgaagggtgtgtattaggaaaaagagg
actgcaagacctcgtggaagttcttgccctgaacagcttgctgaccccacagagaaaaca
aagagtgatactgataagaatatgtctgctatatttaatctgctgaggaggaagaaaaat
gcaaagcttgaacaccttgttttgaacaggatatcatttgcccaaacagtggaaaacatc
tttgccttgtcattcctagtgaaagatggcagagttgaaatcaaggtgaatgatgagggg
catcatattgtctatccaaggaatgcacctgctgctagcgccattgcctcaggaaaagtg
atctacaaccacttcgtcttcagatttgatttcaaagactggaagctcatgaaaggggtg
gttccagagagggaagagcttatgccgcacaggtcttctcaggatgcacctggcataaca
gcaagcagtcaccctgaacctgagttgtcccagcccacacagagcgcaccgatcaggaag
cgatgcaggaatcggggcctggtcttgcaagacgagattgttgccacgggcgcacgggaa
atcacggcaggcaggacagtagccacaggcgcgcagcaagttgtggaagatgaggtggcg
gcacccacgggcccaaaggaagccatggaagatgagactggagcagggacgagcgcgagg
gaagtcatggacaacgagatggtggccaagtacacgaaggagatcaagctgacgtacaag
cgtaggtgcctcttccaggaccaggattga
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