Panicum virgatum (switchgrass): 120704017
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Entry
120704017 CDS
T07260
Name
(RefSeq) APETALA2-like protein 4 isoform X1
KO
K09284
AP2-like factor, euAP2 lineage
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120704017
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Other transcription factors
AP2/ERF
120704017
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AP2
LDL
Motif
Other DBs
NCBI-GeneID:
120704017
NCBI-ProteinID:
XP_039844188
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All DBs
Position
4K:complement(40302020..40305312)
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AA seq
449 aa
AA seq
DB search
MAATKRSFHGGAVGGGIARAVAEDELQADRQEEGAASWMIFGFPVPGLPTTARAAAAVTQ
QFFPAAAPAPPQAAEQCHVSASATDQWARSASRKSRRGPRSRSSQYRGVTFYRRTGRWES
HIWDCGKQVYLGGFDTAQAAASLFSGPCLDSRAYDQAAIKFRGVNADINFTLSDYKDEIK
KMKNFSKEEFVQVLRRQGAGFVRGSSRFRGVTQHKCGKWEAKIGQLMGKKYVYLGLYNTE
MEAAQAYDKAAIKCYGKEAVTNFEAQTYDEELQVQPWDGELDLELSLGCAGGDPSTVAVE
PCSSAPSRQRTMTLTLDLPEDDEKTGAGHPHGSIRTMPSPAPGTFRLLPPAGDHAHVPGT
GVRDDTAHMLQMGQVGSSGGAAAAHMRWPNGGNNWAPPYATARADDDAAAAAAAAAASSG
FPPGQLGRSRPRRPGPAAAERVQHQQQWH
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaccaagagatccttccacggcggcgccgtcggcggcggcattgcgcgcgcc
gtggcggaggacgagctgcaggccgaccggcaggaggaaggcgctgctagctggatgatc
ttcggcttcccggtgcccgggctgcccaccaccgcccgggcggccgccgccgtcacccag
cagttcttcccggccgccgcgccggcgccgccgcaggcggcggagcagtgccacgtgtcc
gcgtcggcgaccgaccagtgggcgcggtcggcgtcgcggaagagccgccgcgggccgcgg
tcccggagctcgcagtaccgcggcgtcaccttctaccgccgcaccggtcggtgggagtcc
cacatctgggactgtgggaagcaggtgtacctgggtggatttgacaccgcacaggctgct
gcgagtttgttctccggcccctgccttgattccagggcctatgaccaagcggcaatcaag
ttccgcggcgtgaacgcagacatcaacttcaccctgagcgactacaaggatgagataaag
aagatgaagaacttcagcaaggaggagttcgtccaggtgctccggcgacagggcgccggc
ttcgtcagggggagctccaggttccggggagtcacccagcacaagtgcggcaagtgggag
gccaagatcggccagctcatgggcaagaagtatgtgtaccttggcctctataacacggag
atggaggctgcccaggcttatgataaggctgccatcaagtgctacggcaaggaggcagtg
accaactttgaggcccagacgtacgacgaggagctccaagtgcagccttgggacggtgag
cttgacctcgagctcagcctcggctgcgccggcggcgacccttccaccgtcgccgtcgag
ccgtgcagctccgcgccgagcaggcagaggacaatgaccctcacgctcgacctgccggag
gacgacgagaagacgggcgccggtcaccctcacgggagcatccgcaccatgccttccccg
gctccgggcacgttccggctcctccccccggccggcgatcacgctcacgtccccggcacc
ggcgtcagggatgacacggcgcacatgctccagatgggccaggtcggcagcagtggaggc
gcggcagcggcacacatgcgctggcccaacggcggcaataattgggcgccgccgtacgcc
accgcccgggccgacgacgacgccgccgccgccgccgccgctgcagcagcatcatcagga
ttcccaccggggcagctgggtcgcagccgcccgcggcgtccaggcccggccgctgctgag
cgtgtccagcaccagcaacagtggcactga
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