Panicum virgatum (switchgrass): 120704060
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Entry
120704060 CDS
T07260
Name
(RefSeq) cysteine desulfurase 1, chloroplastic-like
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00450
Selenocompound metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
120704060
Enzymes [BR:
pvir01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
120704060
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
120704060
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Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
120704060
NCBI-ProteinID:
XP_039844245
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Position
4K:complement(40850681..40858336)
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AA seq
460 aa
AA seq
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MAAAAAGLRCCFPGSSAIGSGFAKPSSSGWGWCAGAVAAPSREAEPVASLGQRTRVDFPI
LHQEFDGAKLVYFDNGATSQKPSSVMKTLDDYYRSYNSNVHRGIHALSAKATDAYESARR
KVANFVNAPNSREIIFTRNATEAINLVAYSWGLSNLKQGDEIVLTVAEHHSAIVPWQFVS
QKTGATLKYVGLTKEEVPDIEQLKGLLSNKTKIVVVHHVSNVLGSMLPIEEIVTWSNRVG
AKVLVDACQSIPHMPVDVQKLGADFLVASSHKMCGPTGVGFLHGKIDILSSMEPFLGGGE
MIADVFQDKSTYAEPPSRFEAGTPAIGEAIGMGAAIDYLTCIGMDRIHEYEKELASYLYE
SLISVPNVRIYGPAPSQTDHRAPLCSFNVENIHPTDIAQILDLQHGVAIRSGHHCAQILH
RTLGINASARASLHFYNTKEEVDVFVDALKATIDVLTSQH
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggcggggctccgctgctgcttccccggctcctccgcgattggtagt
ggcttcgcgaagccctcctcctcggggtggggctggtgcgcgggggccgtagcggcgccg
tcgagggaggcggagccggtcgcttcgcttgggcaacgcacccgcgtcgacttccccatc
cttcaccaggaatttgatggtgccaaattagtttacttcgacaatggtgcaacatcacag
aaaccttctagtgtaatgaaaacattagatgactactaccgatcatacaattctaatgtt
catcgtggtattcatgcactcagcgcaaaggctactgatgcatatgagagcgcaagaaga
aaagttgcaaattttgtcaatgcacctaatagcagagagatcattttcactcgtaatgct
actgaagctatcaatttggtagcttattcatggggcctgtctaacttaaaacaaggagat
gagattgttcttacagttgcggagcatcatagtgctattgttccatggcaatttgtttcc
cagaagactggtgccaccttgaagtatgttgggttgactaaagaggaggtcccagatatt
gagcaattaaaagggcttctgtcaaacaagacaaagatagttgttgtccatcatgtctca
aacgtactgggttcgatgcttcctattgaggaaattgtaacatggtcaaacagagttgga
gctaaagttcttgtagatgcttgtcaaagtatcccccatatgccagttgatgttcagaaa
cttggcgcagactttcttgttgcgtcctcgcacaagatgtgtggccctacaggcgttgga
tttttgcatggaaaaattgacatcttgtcatctatggagcctttcttaggcggcggtgaa
atgattgcagatgtgttccaagataagtccacatatgctgagcctccctctagatttgag
gctggaactcctgcaataggagaagctataggaatgggagcagcaattgactatttaaca
tgcattggcatggaccggatccacgaatatgagaaagagttggcgtcatatctctatgaa
agccttatttccgttccaaatgtccggatatatggtccagcaccttcccaaactgatcac
cgtgctcctttatgttccttcaatgttgagaatattcatcccacagatattgcacaaatt
cttgatctccagcatggtgtagcaattcggtcagggcatcattgtgctcagattttgcat
aggacccttggtatcaatgcaagtgcccgtgcaagtcttcacttctacaatacaaaagag
gaggtggatgtcttcgttgatgctcttaaagctactattgatgtccttacgtcccaacac
tag
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