Panicum virgatum (switchgrass): 120704063
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Entry
120704063 CDS
T07260
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z33-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120704063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120704063
Spliceosome [BR:
pvir03041
]
Common components
Common spliceosomal components
SR proteins
120704063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
RRM_5
RRM_occluded
zf-CCHC_2
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
120704063
NCBI-ProteinID:
XP_039844247
LinkDB
All DBs
Position
4K:complement(40892408..40896223)
Genome browser
AA seq
322 aa
AA seq
DB search
MCSVDMPRYDDRYGNTRLYVGRLSSRTRTRDLEYLFSKYGRIREVELKRDYAFIEFSDPR
DADDAQYNLDGREVDGSRIIVEFAKGVPRGSGGSREYMGRGPPPGTGRCFNCGTDGHWAR
DCKAGDWKNKCYRCGERGHIERNCQNSPRNLRRERSYSRSPSPRRGRGRSRSYSRSRSYS
RSRSPSGSPRGGRRDRDERRSRSLSYSRSPRRSASPSAKEKERSSTPNDSRSPRSPRPRD
QMSPPPKDNGERNGSDRGDSPVRRENSRSRSRSRSRSPSDGYRSPAANGRSPSPRDDRSP
SPKGNAGDDDGGRGSPRGSQSP
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcagtagacatgcctcgctatgatgatcgttatgggaacacacgcttgtatgtt
ggcagactgtcctcccgcactcgtacccgtgatctggaatatcttttcagcaaatatgga
agaatacgagaagtggagttgaagcgcgactatgcatttattgaattcagcgatcctcgt
gatgctgatgatgcacaatacaacctagatggcagggaagttgatggcagccgcattatc
gttgagtttgctaaaggggttcctcgtggttctggtggctcacgcgagtacatgggaaga
gggcctccgccagggacaggtcgctgttttaactgtggaactgatggtcactgggcaagg
gattgcaaggctggtgactggaagaacaaatgctaccgttgtggagaaaggggccacata
gaaagaaattgccagaacagtccaaggaatctcaggcgtgagagaagttattcacggtca
ccatctccacgccgtggacgggggcgcagccggagctacagcagaagccggagctatagc
cgttctagatccccatctggatctcccaggggtggacgccgagaccgtgatgagaggaga
tcaaggagtcttagctacagcaggagccccaggcgttctgcttcaccaagtgcaaaggaa
aaggagcgcagctccacacctaacgacagtaggagcccaaggagtccccgcccaagggat
cagatgagcccgccaccaaaggacaatggtgaacgcaacggttcagaccgtggtgacagc
cctgtgaggagggagaacagcaggagcaggagcaggagcaggagccgtagcccatctgat
ggctaccgtagccctgcagccaatgggcgcagcccgagccctagagatgaccggagccct
agtcccaaaggcaatgctggtgatgatgatggcggccggggttcaccaagaggaagccag
tccccctga
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